Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0452
         (767 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   1.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.5  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = -2

Query: 643 IGIFKNVENHNVCPFEVFLMSLCNIRNNMLTVKLLLKHSYALNST 509
           +G+ K   +HN   + + +M +C+I  ++   K+ L+  +  N T
Sbjct: 195 MGVSKPTRDHNAFEYAMAVMKMCDIL-HLRHTKIWLRPDWLFNLT 238


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 564 LRILHNDIKNTSKGHTLW 617
           LR++ NDI N S+G  LW
Sbjct: 483 LRLIGNDIGNLSRG-MLW 499


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 391  NTLISSYIYREH 426
            NTL+ S++Y EH
Sbjct: 1734 NTLLHSFMYHEH 1745


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 391  NTLISSYIYREH 426
            NTL+ S++Y EH
Sbjct: 1730 NTLLHSFMYHEH 1741


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 646 IIGIFKNVENHNVCPFEVF 590
           I+    NVE HN  PF ++
Sbjct: 461 ILSAAYNVELHNSSPFSIY 479


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 646 IIGIFKNVENHNVCPFEVF 590
           I+    NVE HN  PF ++
Sbjct: 499 ILSAAYNVELHNSSPFSIY 517


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 527 LCSQLDSDC*PGNT 486
           +C++L +DC PG T
Sbjct: 644 ICTKLTADCQPGVT 657


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,381
Number of Sequences: 438
Number of extensions: 4148
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)