Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0451
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.20 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
 Frame = -1

Query: 722 GKP*WRTVAILTCKSIVGTGIGAKD*SNHLVAGS------VRSFPQDSWRRYKI---LKQ 570
           G P     A+LTCK         K+ SNH+V  S      +RS  +   RR +     K+
Sbjct: 538 GGPSSHVSAVLTCKVCDQAFSSLKELSNHMVKNSHYKEHIMRSITESGGRRRQTREKRKK 597

Query: 569 SHPVKRMIRGIGAETTSTYSQL*MGENSGLLER*SRRSDDGA 444
           S PV++++     E      +   G++S LL++   R   GA
Sbjct: 598 SLPVRKLL-----ELERAQHEFKNGDSSSLLDK--MRDSSGA 632


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +3

Query: 225 IGKTLQRHPFQGWLLRQVSRCTLLSGFR 308
           +G    RHP++ W    +S  T   G +
Sbjct: 153 LGSVYSRHPYESWPFNTMSGATHHGGIK 180


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 85  PRSAPTEAPSGLTPR 129
           PRS+P E  S L+P+
Sbjct: 154 PRSSPAETASSLSPQ 168


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 326 GRWPWKSESAKECATTHLPKQPAL 255
           GR  WK    +  AT  L K P+L
Sbjct: 79  GRKAWKHLDFRNSATAELLKNPSL 102


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 326 GRWPWKSESAKECATTHLPKQPAL 255
           GR  WK    +  AT  L K P+L
Sbjct: 79  GRKAWKHLDFRNSATAELLKNPSL 102


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 85  PRSAPTEAPSGLTPR 129
           PRS+P E  S L+P+
Sbjct: 145 PRSSPAETASSLSPQ 159


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 285 NDSPAEATSPEMDGAE 238
           NDSP    S E+DG E
Sbjct: 418 NDSPESNRSNEIDGPE 433


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 275 LPKQPALKWMALKRFAYTLP 216
           LP+   ++W+ L  FAY +P
Sbjct: 113 LPEVERVQWIWLLIFAYLIP 132


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 275 LPKQPALKWMALKRFAYTLP 216
           LP+   ++W+ L  FAY +P
Sbjct: 113 LPEVERVQWIWLLIFAYLIP 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,659
Number of Sequences: 336
Number of extensions: 4018
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)