Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0451
(722 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL445068-2|CAI22520.1| 366|Homo sapiens protein ( Human DNA seq... 33 1.4
AL050350-5|CAI42513.1| 366|Homo sapiens protein ( Human DNA seq... 33 1.4
DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain conta... 30 7.3
BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4... 30 7.3
BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4... 30 7.3
AL117481-1|CAB55954.1| 319|Homo sapiens hypothetical protein pr... 30 7.3
AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane trans... 30 7.3
U77735-1|AAC78506.1| 334|Homo sapiens pim-2 protooncogene homol... 30 9.6
BC112034-1|AAI12035.1| 157|Homo sapiens hypothetical protein LO... 30 9.6
BC093711-1|AAH93711.1| 157|Homo sapiens hypothetical protein LO... 30 9.6
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 30 9.6
>AL445068-2|CAI22520.1| 366|Homo sapiens protein ( Human DNA
sequence from clone RP1-71D21 on chromosome 6. ).
Length = 366
Score = 32.7 bits (71), Expect = 1.4
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 40 PRQSSRASLEYLLLPPRSAPTEAPSGLTPRPFCALRRARPTRYG 171
PR +SR + Y+ R+ P SG TP P C R RP R G
Sbjct: 65 PRGASRRQVTYVRSGRRAPPGGGGSG-TPEPGCCAPRGRPRRKG 107
>AL050350-5|CAI42513.1| 366|Homo sapiens protein ( Human DNA
sequence from clone RP1-261K5 on chromosome 6q21-22.1
Contains the 3' end of the SLC22A16 gene for solute
carrier family ).
Length = 366
Score = 32.7 bits (71), Expect = 1.4
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 40 PRQSSRASLEYLLLPPRSAPTEAPSGLTPRPFCALRRARPTRYG 171
PR +SR + Y+ R+ P SG TP P C R RP R G
Sbjct: 65 PRGASRRQVTYVRSGRRAPPGGGGSG-TPEPGCCAPRGRPRRKG 107
>DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain
containing 4 protein.
Length = 1048
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 442 SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 347
+GP+LV G T +++KAP SW+T+ G
Sbjct: 246 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 276
>BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4
protein.
Length = 1049
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 442 SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 347
+GP+LV G T +++KAP SW+T+ G
Sbjct: 247 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 277
>BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4
protein.
Length = 1049
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 442 SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 347
+GP+LV G T +++KAP SW+T+ G
Sbjct: 247 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 277
>AL117481-1|CAB55954.1| 319|Homo sapiens hypothetical protein
protein.
Length = 319
Score = 30.3 bits (65), Expect = 7.3
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 37 SPRQSSRASLEYLLLPPRSAPTEAPS--GLTPRPFCALRRARPTRYGLMIPN*KFSITR 207
SP RAS PPR++PT PS LT P A P+R LM SITR
Sbjct: 11 SPMTPPRASPR---TPPRASPTTTPSRASLTRTPSWASPTTTPSRASLMKMESTVSITR 66
>AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane
transporter protein protein.
Length = 283
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -1
Query: 710 WRTVAILTCKSIVGTG 663
WR+VA+LTCKS+V G
Sbjct: 16 WRSVAVLTCKSVVRPG 31
>U77735-1|AAC78506.1| 334|Homo sapiens pim-2 protooncogene homolog
pim-2h protein.
Length = 334
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 19 LFTRNPSPRQSSRASLEYLLLPP-RSAPTEAPSGLTPRPFCALRRARPTRYGLMI 180
L R +P+ SSR SLE +LL P P E +TP+P L+R RP +GL++
Sbjct: 262 LIRRCLAPKPSSRPSLEEILLDPWMQTPAE---DVTPQP---LQR-RPCPFGLVL 309
>BC112034-1|AAI12035.1| 157|Homo sapiens hypothetical protein
LOC284009 protein.
Length = 157
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 20 CSRETLLHVSPPGPRWSICYYHQDLHR-RRLQAGSRPDP 133
C R ++H+ G RW + HR RR GSRP P
Sbjct: 40 CGRPAVVHIGGEGARWEKGARGRKEHRLRRSDLGSRPVP 78
>BC093711-1|AAH93711.1| 157|Homo sapiens hypothetical protein
LOC284009 protein.
Length = 157
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 20 CSRETLLHVSPPGPRWSICYYHQDLHR-RRLQAGSRPDP 133
C R ++H+ G RW + HR RR GSRP P
Sbjct: 40 CGRPAVVHIGGEGARWEKGARGRKEHRLRRSDLGSRPVP 78
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +1
Query: 25 TRNPSP----RQSSRASLEYLLLPPRSAPTEAPSGLTPRPFCALRRARPTR 165
TR+PS R SRASL PPR++PT P +PR RA PTR
Sbjct: 168 TRSPSTASLTRTPSRASLTRW--PPRASPTRTPPRESPR---MSHRASPTR 213
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,605,683
Number of Sequences: 237096
Number of extensions: 2721768
Number of successful extensions: 10013
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9995
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -