Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0448
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.15 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.2  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.6  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -3

Query: 562 HKYFSLLIDIFHTRHLFVRSVKY*IFRYTSLFLHFLYVFILYVFECIPTLYVQHL 398
           H  F L I  F     F+  + Y    +    +H L++  +Y F C   ++  HL
Sbjct: 126 HLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHL 180



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/50 (20%), Positives = 23/50 (46%)
 Frame = -3

Query: 556 YFSLLIDIFHTRHLFVRSVKY*IFRYTSLFLHFLYVFILYVFECIPTLYV 407
           +F L    F+   + +  V Y  + +    +H L++  +Y F  +P  ++
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF-VVPLFFL 143


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 351 TGTNSVVPSCCGFKFRPELLM 289
           TGT +V+PS    K+R ++++
Sbjct: 272 TGTKTVMPSQSAIKYRKQVIL 292


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 469 FLHFLYVFILYVFECIPTLYVQHL 398
           +LH LY+F++ +       Y+ H+
Sbjct: 629 WLHLLYIFLVGIMYAADVFYICHV 652


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -3

Query: 622 NNTKLFPQTPTSQLIQHIWHHKYFSLLIDIFHTRHLFVRSVKY*IFRYTSLFLHFLYVFI 443
           NN+         QLI H+++   F+LL+         V  VK   F Y  L+  F+  F+
Sbjct: 99  NNSSFVVANVLFQLI-HVYYTVVFTLLLG--------VDFVKEYAFEYIQLYSQFILYFL 149

Query: 442 LY 437
           L+
Sbjct: 150 LF 151


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -3

Query: 622 NNTKLFPQTPTSQLIQHIWHHKYFSLLIDIFHTRHLFVRSVKY*IFRYTSLFLHFLYVFI 443
           NN+         QLI H+++   F+LL+         V  VK   F Y  L+  F+  F+
Sbjct: 99  NNSSFVVANVLFQLI-HVYYTVVFTLLLG--------VDFVKEYAFEYIQLYSQFILYFL 149

Query: 442 LY 437
           L+
Sbjct: 150 LF 151


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -3

Query: 622 NNTKLFPQTPTSQLIQHIWHHKYFSLLIDIFHTRHLFVRSVKY*IFRYTSLFLHFLYVFI 443
           NN+         QLI H+++   F+LL+         V  VK   F Y  L+  F+  F+
Sbjct: 419 NNSSFVVANVLFQLI-HVYYTVVFTLLLG--------VDFVKEYAFEYIQLYSQFILYFL 469

Query: 442 LY 437
           L+
Sbjct: 470 LF 471


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -2

Query: 668 WHIFL-NIYYAYYSIH 624
           + I+L  +YY YYS+H
Sbjct: 149 YFIYLFTVYYIYYSVH 164


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 108 ADFAKHLSIRSTTGSIDTIPVK 173
           +D     SIRST    D++P+K
Sbjct: 512 SDVTVETSIRSTASFWDSLPIK 533


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 108 ADFAKHLSIRSTTGSIDTIPVK 173
           +D     SIRST    D++P+K
Sbjct: 512 SDVTVETSIRSTASFWDSLPIK 533


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 108 ADFAKHLSIRSTTGSIDTIPVK 173
           +D     SIRST    D++P+K
Sbjct: 512 SDVTVETSIRSTASFWDSLPIK 533


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 108 ADFAKHLSIRSTTGSIDTIPVK 173
           +D     SIRST    D++P+K
Sbjct: 512 SDVTVETSIRSTASFWDSLPIK 533


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 108 ADFAKHLSIRSTTGSIDTIPVK 173
           +D     SIRST    D++P+K
Sbjct: 512 SDVTVETSIRSTASFWDSLPIK 533


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 502 RNEQINALCEKYLLEARSIYDAK 570
           +NE++ AL  KY   A++  DAK
Sbjct: 185 QNEEVTALKIKYNPFAKAFLDAK 207


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 269 IPEALKAISSSGLNLNPQQDGTTL 340
           +P A   + + GLNLNP    T L
Sbjct: 184 VPPAGIPLQNPGLNLNPPVTQTQL 207


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 268 HTGGLESHQ*FWSKFKSTTRW 330
           H GG E H   W+   S  +W
Sbjct: 361 HMGGDEVHLGCWNSTPSIVQW 381


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
          protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 71 HLVYWYKFGENCHIN 27
          H+V+W++ G   H N
Sbjct: 18 HMVHWFRRGLRLHDN 32


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = -2

Query: 161 CVYRASG*SYRQMFSKIRLHVFNSGTAAVFHLVYWYKFGENCHIN 27
           C  RASG  Y  +  +     F        + VY  K+G NC I+
Sbjct: 191 CGDRASGYHYNALTCEGCKGFFRRSITK--NAVYQCKYGNNCEID 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,342
Number of Sequences: 336
Number of extensions: 3710
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)