Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0445
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   6.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.2  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 388 NELPTDEFSMLVYTIAVEFSHSR 456
           +E+P D F  L     V+FSH+R
Sbjct: 309 SEIPNDLFRFLGNLRIVDFSHNR 331


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 608  WSTATSCGSATDRKLLESTSH*TLDSSWP 522
            W+T T+  + T R    ST+     ++WP
Sbjct: 1052 WTTTTTRRTTTTRPTTTSTTTRPTTTNWP 1080


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 332 WLYLVLWILKYTLLFSHKVMNFQLTSSV 415
           W  L  WI+ YTL    +VM  Q  + V
Sbjct: 161 WRCLYRWIVLYTLSKMSQVMLIQFCAFV 188


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 548 GKYFLTISCPLPTHSL*QYSMVFRLL 625
           G  F T+   +P H+  +Y  VF++L
Sbjct: 263 GSVFNTVLELMPKHACSEYCRVFKML 288


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 554 YFLTISCPLPTHSL*QYSMVFRL 622
           Y  TI+ PL    L  Y+M FR+
Sbjct: 323 YDSTITAPLSNPPLWPYTMYFRM 345


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,298
Number of Sequences: 336
Number of extensions: 3544
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)