Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0442
(485 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical... 28 3.1
AF040661-11|AAG24210.1| 211|Caenorhabditis elegans Hypothetical... 27 5.5
Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical pr... 27 7.2
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL132847-1|CAB63371.1| 375|Caenorhabditis elegans Hypothetical ... 27 7.2
AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein. 27 7.2
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 27 9.5
U64856-3|AAB04987.1| 392|Caenorhabditis elegans Hypothetical pr... 27 9.5
L23651-8|AAK84495.1| 500|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 27 9.5
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 27 9.5
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 27 9.5
AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical... 27 9.5
>AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical
protein W10G11.6 protein.
Length = 426
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 301 RPSGRWCEATIRGIMPNASKAEASLAESGKDMLTVEPRE 185
RPSG WC GI +AE + A G + ++ R+
Sbjct: 93 RPSGGWCMRVFTGIHDAKIEAERACAAKGGTLTGLQNRD 131
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -2
Query: 340 REEPQFRTFGSCTRPSGRWCEATIRGIMPNASKAEASLA 224
R EP +R F RPSG WC G +A+KA+A A
Sbjct: 255 RCEPGWRFFN---RPSGGWCIRVFTGF--HAAKADAEAA 288
>AF040661-11|AAG24210.1| 211|Caenorhabditis elegans Hypothetical
protein W10G11.15 protein.
Length = 211
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -2
Query: 301 RPSGRWCEATIRGIMPNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 137
RPSG WC G + AE S G + ++ R Q ++++ S
Sbjct: 49 RPSGGWCMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARS 103
>Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical
protein C23H4.1 protein.
Length = 425
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +3
Query: 174 EPPDSRGSTVSISLPDSARLASALEAFGIIPRMVASHHRPLGRVHEPNVRNCGSSRTEQY 353
+ P T+S D RLA++ E G PR +S L V G+ Y
Sbjct: 263 QEPQPAKQTISSQTVDKRRLATSAEYSGSAPRYSSSSLLLLAVGTVMCVGLIGTVAGGTY 322
Query: 354 YYRNDK 371
YY+N++
Sbjct: 323 YYKNNR 328
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 37 YIRTFGAVMHVLRKKPIASISAIQMGFDVASRVLNA 144
YIRT +VLRKKP S+ D +++NA
Sbjct: 264 YIRTVRGSQYVLRKKPSGSLLPKAHQVDREFKIMNA 299
>AL132847-1|CAB63371.1| 375|Caenorhabditis elegans Hypothetical
protein Y48G10A.2 protein.
Length = 375
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/51 (19%), Positives = 28/51 (54%)
Frame = -2
Query: 274 TIRGIMPNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETR 122
+++G + + + ++ K ++ EP+E+ + D+ + ++HSK E +
Sbjct: 306 SLKGQIKSENYTSIAVTRLYKMLIRTEPKETALRRAADYLNELTHSKTEKK 356
>AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein.
Length = 425
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +3
Query: 174 EPPDSRGSTVSISLPDSARLASALEAFGIIPRMVASHHRPLGRVHEPNVRNCGSSRTEQY 353
+ P T+S D RLA++ E G PR +S L V G+ Y
Sbjct: 263 QEPQPAKQTISSQTVDKRRLATSAEYSGSAPRYSSSSLLLLAVGTVMCVGLIGTVAGGTY 322
Query: 354 YYRNDK 371
YY+N++
Sbjct: 323 YYKNNR 328
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -3
Query: 252 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 103
T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -3
Query: 252 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 103
T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 26.6 bits (56), Expect = 9.5
Identities = 20/96 (20%), Positives = 39/96 (40%)
Frame = +3
Query: 33 ELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSIS 212
++Y DL+ ++ S++ N R++ + R + PD G + ++
Sbjct: 1147 QVYQDLKRVKFDRERLNGSLE-EQLNKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLN 1205
Query: 213 LPDSARLASALEAFGIIPRMVASHHRPLGRVHEPNV 320
D LA+ E + + H R L + HE N+
Sbjct: 1206 ESDQQTLATLTEQIKVTQAEIELHRRDL-KKHESNL 1240
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 26.6 bits (56), Expect = 9.5
Identities = 20/96 (20%), Positives = 39/96 (40%)
Frame = +3
Query: 33 ELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSIS 212
++Y DL+ ++ S++ N R++ + R + PD G + ++
Sbjct: 1147 QVYQDLKRVKFDRERLNGSLE-EQLNKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLN 1205
Query: 213 LPDSARLASALEAFGIIPRMVASHHRPLGRVHEPNV 320
D LA+ E + + H R L + HE N+
Sbjct: 1206 ESDQQTLATLTEQIKVTQAEIELHRRDL-KKHESNL 1240
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 26.6 bits (56), Expect = 9.5
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +3
Query: 51 RSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSAR 230
+S + + D ++ +P R+RV+R K++CL PP+S +S PD
Sbjct: 11 QSMEIETNENPDKVE--EPVVRRKRVTRRRHRRIHSKNNCLTPPNS-DDDPQMSTPDDPV 67
Query: 231 LASALEAFGIIPRMVASH 284
+ S + G P M H
Sbjct: 68 IHSP-PSIGAAPGMNGYH 84
>U64856-3|AAB04987.1| 392|Caenorhabditis elegans Hypothetical
protein T25F10.4 protein.
Length = 392
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 237 SALEAFGIIPRMVASHHRPLGRV-HEPNVRNCGSSRT 344
S L+AFGII + +HH V E ++N SSR+
Sbjct: 72 SELDAFGIITESLENHHVSKSIVTRENQIQNVRSSRS 108
>L23651-8|AAK84495.1| 500|Caenorhabditis elegans Hypothetical
protein C29E4.10 protein.
Length = 500
Score = 26.6 bits (56), Expect = 9.5
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = -2
Query: 322 RTFGSCTRPSGRWCEATIRGIMPNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVS 143
R TRPS WC + IR P A A+ + + +E + DF R
Sbjct: 388 RAVQKVTRPSISWCTSHIR--TPYAVMADIEVINCRGIFVEIEFSNKKVTIFSDFVDRSI 445
Query: 142 HSKRETRRRSPFG 104
++ + RR+ FG
Sbjct: 446 IAEFKARRKVEFG 458
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -3
Query: 252 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 103
T L PA PN AR S W E+ + NN + + +I +R++ H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 26.6 bits (56), Expect = 9.5
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 168 NVTLLVAFR-IQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQF 28
N L+AF + A+ D EAHL+ +RC R H G +I QF
Sbjct: 1134 NEKFLLAFALVLRAKYDHEAHLNLVNRCMRNVC-KTHFGETVDEIFQF 1180
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 26.6 bits (56), Expect = 9.5
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +3
Query: 51 RSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSAR 230
+S + + D ++ +P R+RV+R K++CL PP+S +S PD
Sbjct: 11 QSMEIETNENPDKVE--EPVVRRKRVTRRRHRRIHSKNNCLTPPNS-DDDPQMSTPDDPV 67
Query: 231 LASALEAFGIIPRMVASH 284
+ S + G P M H
Sbjct: 68 IHSP-PSIGAAPGMNGYH 84
>AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical
protein W10G11.14 protein.
Length = 210
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 334 EPQFRTFGSCTRPSGRWCEATIRGIMPNASKAEA 233
EP ++ F RPSG WC G NA KA+A
Sbjct: 41 EPGWKFFN---RPSGGWCMRVFAGF--NAKKADA 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,185,556
Number of Sequences: 27780
Number of extensions: 223049
Number of successful extensions: 710
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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