Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0440
(800 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 26 0.47
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 26 0.47
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 26 0.47
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 26 0.47
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 26 0.47
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 26 0.47
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 3.3
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 3.3
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 3.3
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 3.3
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 5.8
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 5.8
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 7.6
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.47
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 661 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 563
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.47
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 661 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 563
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.47
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 661 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 563
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.47
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 661 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 563
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.8 bits (54), Expect = 0.47
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 661 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 563
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.47
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 661 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 563
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 661 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 563
RT SC SR + RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRS 258
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 661 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 563
RT SC SR + +RH+ +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDGNSYRNDGERSCSRDRS 258
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 650 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 549
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 650 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 549
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 650 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 549
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = -3
Query: 276 ATSPRTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFH 157
++S T+ P S + +R CS + P+ + FH
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSPHQKKLRFH 363
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 120 PDLSAASSGHFGLPRRTLVFK 58
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -3
Query: 189 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 106
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,326
Number of Sequences: 438
Number of extensions: 6063
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -