Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0438
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.6  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 564 LHFLTFKGSVAIFLTWTDWHNI 629
           LHFLT+  S+ I L + D +N+
Sbjct: 182 LHFLTYNLSLGIKLRYDDVNNL 203


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 564 LHFLTFKGSVAIFLTWTDWHNI 629
           LHFLT+  S+ I L + D +N+
Sbjct: 182 LHFLTYNLSLGIKLRYDDVNNL 203


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 172 NYIIILFVTRFKFSNTYCVFKNCGRLLPKELSQER 276
           N ++ +F+T   F N + V       LP  L + R
Sbjct: 447 NGVLFVFLTNMTFQNVFAVINVFSGELPVFLQEHR 481


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 172 NYIIILFVTRFKFSNTYCVFKNCGRLLPKELSQER 276
           N ++ +F+T   F N + V       LP  L + R
Sbjct: 447 NGVLFVFLTNMTFQNVFAVINVFSGELPVFLQEHR 481


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 81  VFFYLPIIEQFFFIGM*IDLHYLLFVYTLKKLHYNFICNKI 203
           V+ +L ++  F  I M + +  ++F YT+      F+C++I
Sbjct: 242 VYLHLAVMLGFQDIYMIVYIIVVIFWYTVNASTNIFLCDEI 282


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/50 (22%), Positives = 23/50 (46%)
 Frame = +1

Query: 151 CLSIH*KNYIIILFVTRFKFSNTYCVFKNCGRLLPKELSQERCRVNFIKL 300
           C+S + K    I  + R  F  TY +F  C  L  +  +  +   +++++
Sbjct: 479 CVSNYTKQQSKIHLIVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRV 528


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 81  VFFYLPIIEQFFFIGM*IDLHYLLFVYTLKKLHYNFICNKI 203
           V+ +L ++  F  I M + +  ++F YT+      F+C++I
Sbjct: 242 VYLHLAVMLGFQDIYMIVYIIVVIFWYTVNASTNIFLCDEI 282


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 226 VFKNCGRLLPKELSQERCRV 285
           VF     L+PK    E CRV
Sbjct: 265 VFNTVLELMPKHACSEYCRV 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,486
Number of Sequences: 336
Number of extensions: 2739
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)