Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0438
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-3|CAB60972.1|  718|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z83129-8|CAB76728.1|  332|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical...    28   4.9  
AC006675-10|AAK84551.2|  280|Caenorhabditis elegans Serpentine r...    28   4.9  
Z93383-13|CAI58636.1|  206|Caenorhabditis elegans Hypothetical p...    27   8.5  
U42839-3|AAC69014.1|  152|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>AL132904-3|CAB60972.1|  718|Caenorhabditis elegans Hypothetical
           protein Y111B2A.3 protein.
          Length = 718

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 416 WIYATLNVFYIYRNYDISAREETLGMCVTNSYLVFKLATS 297
           W+     +FY YRNYD+S       +  ++++L++   TS
Sbjct: 22  WVQELEAIFYSYRNYDVSKIRVQQFLDRSSNFLIYDFYTS 61


>Z83129-8|CAB76728.1|  332|Caenorhabditis elegans Hypothetical
           protein W06G6.13 protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +1

Query: 145 TSCLSIH*KNYIIILFVTRFKFSNTYCVFKNCGRLLPKELSQERC--RVNFIKLVANLKT 318
           T  LS +   Y++++F+    FS +Y  +       PKE S+++   R+   + V  +  
Sbjct: 128 THRLSSYIFGYLVLIFLLIIHFSISYSFYSELCIEFPKEYSEKQYIRRMRNTENVIAIAH 187

Query: 319 RYEFVTHIPRV 351
           +Y F+T + ++
Sbjct: 188 KYNFITGMSKI 198


>AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.12 protein.
          Length = 1137

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 589 LPLKVKKCNGVPPGLERERETLNESVMERDILRRGAEVNVLSDL 458
           +PL +K      P ++ +   L E +  +DI  + A VNVL++L
Sbjct: 507 MPLSIKSTAEAIPKIKTQLVDLKEYIEGKDIKSKRAAVNVLNEL 550


>AC006675-10|AAK84551.2|  280|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 57 protein.
          Length = 280

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 175 YIIILFVTRFKFSNTYCVFKNCGRLL--PKELSQERCRVN 288
           Y+++ F++ F F + + +F  CG ++  P      +C VN
Sbjct: 126 YLVLFFISLFVFFDQFMLFGYCGNVIDVPVNCENFQCTVN 165


>Z93383-13|CAI58636.1|  206|Caenorhabditis elegans Hypothetical
           protein F54B8.7b protein.
          Length = 206

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +1

Query: 154 LSIH*KNYIIILFVTRFKFSNTYCVFKNCGRLL--PKELSQERCRVN 288
           LSI    +II +F+T     N Y +F  CG  +  P E    +C VN
Sbjct: 42  LSIFYCRFIIDVFLTLSAAFNQYVLFGYCGNSIDVPLECDDFKCTVN 88


>U42839-3|AAC69014.1|  152|Caenorhabditis elegans Hypothetical
           protein F11C7.2 protein.
          Length = 152

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 570 FLTFKGSVAIFLTWTDW 620
           FLTF  + A+  TWTDW
Sbjct: 7   FLTFLATTALAGTWTDW 23


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,320,083
Number of Sequences: 27780
Number of extensions: 255516
Number of successful extensions: 532
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)