Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0437
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    28   0.071
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   1.5  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   2.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   6.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 28.3 bits (60), Expect = 0.071
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 621 RNNFSIRYWSWNYRGCWHQTC 559
           R+NF   +  WNY  CW   C
Sbjct: 746 RHNFKGLHLDWNYPVCWQSNC 766



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/25 (32%), Positives = 9/25 (36%)
 Frame = -2

Query: 633  ELFNRNNFSIRYWSWNYRGCWHQTC 559
            +    NNF      W Y  CW   C
Sbjct: 1930 DFIETNNFDGLDLDWEYPKCWQVDC 1954


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 417 TSKEGSRRANYPLPAREVVTKNNDTGL 497
           T     + A+YP P  E+V + ND  +
Sbjct: 250 TPARNPKEADYPSPLYELVDRRNDENI 276


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 217 SIGFDLIQALIPSLVRVLIACIS 149
           S+G+ LIQ  IPS + V+I+ +S
Sbjct: 66  SMGYYLIQIYIPSGLIVIISWVS 88


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 417 TSKEGSRRANYPLPAREVVTKNND 488
           T K   + A+YP P  E++ +  D
Sbjct: 242 TPKRNPKEADYPAPLYELIDRKYD 265


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = -2

Query: 612 FSIRYWSWNYRGCWHQ 565
           +++ YW   Y   WH+
Sbjct: 117 YAVYYWRQQYEDFWHR 132


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 310 HLKDASPVLDHAICKSYPDH 251
           +L D+SP L+ A C+ +  H
Sbjct: 63  NLCDSSPCLNGATCQDHTTH 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,156
Number of Sequences: 336
Number of extensions: 3714
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)