BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0432
(721 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 1.8
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 7.2
Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related prot... 23 9.5
AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotens... 23 9.5
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 23 9.5
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 25.4 bits (53), Expect = 1.8
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +2
Query: 2 ADYASAVEKSKHLYEEKKS-----EVITNVVNKLIRNNKMNCMEYAYQLWLQGSK 151
AD+ H+Y E+K ++ N + K R+N + M+Y + + + K
Sbjct: 677 ADFCDVWINIAHIYVEQKQYISAIQMYENCLKKFYRHNNVEVMQYLARAYFRAGK 731
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.4 bits (48), Expect = 7.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 604 RCIPRPCGDPRAQPSSTVSKPCC 536
+C+P GDP A+P + + C
Sbjct: 865 QCLPGHFGDPLAEPHGSCEECSC 887
>Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related
protease protein.
Length = 273
Score = 23.0 bits (47), Expect = 9.5
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -2
Query: 696 HSHWFVVETLYYNLESLYTPSVMFGTSDYSAVVSPGHAVTRGLNRPRQCQSLAVFTVVDV 517
+S W + +L S P+V G+S+++A + H V R + P S + + +
Sbjct: 78 NSKWILTAAHCIDLYSQVKPTVRVGSSEHAAGGTVLHLV-RIVPHPGHSSSANNYDIALL 136
Query: 516 EQES 505
E ES
Sbjct: 137 ELES 140
>AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotensin
converting enzymeprecursor protein.
Length = 339
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 139 PGLQGHRPGLFPS 177
PGL+G RP FP+
Sbjct: 35 PGLEGRRPVTFPN 47
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 23.0 bits (47), Expect = 9.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 402 WESALTGTATIWPS 443
W S TGTA IW S
Sbjct: 45 WVSDSTGTAAIWAS 58
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,770
Number of Sequences: 2352
Number of extensions: 14970
Number of successful extensions: 88
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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