Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0423
         (751 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K876 Cluster: WD domain, G-beta repeat domain contain...    36   1.4  
UniRef50_Q9VIX6 Cluster: GH19142p; n=2; Drosophila melanogaster|...    34   3.3  
UniRef50_Q17PF2 Cluster: Putative uncharacterized protein; n=2; ...    34   3.3  
UniRef50_A2GG87 Cluster: Putative uncharacterized protein; n=3; ...    33   5.7  
UniRef50_Q7S0V9 Cluster: Putative uncharacterized protein NCU097...    33   5.7  
UniRef50_Q29K42 Cluster: GA14551-PA; n=3; Drosophila|Rep: GA1455...    33   7.5  
UniRef50_Q7RJ00 Cluster: Putative uncharacterized protein PY0346...    33   9.9  

>UniRef50_A5K876 Cluster: WD domain, G-beta repeat domain containing
           protein; n=4; Plasmodium|Rep: WD domain, G-beta repeat
           domain containing protein - Plasmodium vivax
          Length = 644

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 19/45 (42%), Positives = 26/45 (57%)
 Frame = +3

Query: 252 NTTERSRITELQKQLSITTEKSPSIKSKTKLIRSQIKLNFYTQFS 386
           N+ E  +I EL++QL     K  SI +K   +RS IK  FYT+ S
Sbjct: 137 NSPEYLKINELEEQLGTKRLKQQSIAAKGITVRSTIKEKFYTESS 181


>UniRef50_Q9VIX6 Cluster: GH19142p; n=2; Drosophila
           melanogaster|Rep: GH19142p - Drosophila melanogaster
           (Fruit fly)
          Length = 287

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 257 NGEVKNHRAAETVVNNNGKVTKYKVEN 337
           NG+  + R A+T VN+NGK+T Y V +
Sbjct: 261 NGDGTSRRGAQTTVNDNGKITSYSVHS 287


>UniRef50_Q17PF2 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 241

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +2

Query: 269 KNHRAAETVVNNNGKVTKYKVEN 337
           ++HR A T VN+NGKVT Y V N
Sbjct: 219 QSHREASTTVNDNGKVTTYHVRN 241


>UniRef50_A2GG87 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 290

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 21/42 (50%), Positives = 25/42 (59%)
 Frame = +1

Query: 1   SRYLISHRPDSPTNSSPRCRTIRISSARSPEPRLARVSVTKL 126
           SR + S RP S  NSS   RTIRI++ R PE R  R S T +
Sbjct: 15  SRIITSSRPQSTLNSS---RTIRITTQR-PEKRTIRASTTSI 52


>UniRef50_Q7S0V9 Cluster: Putative uncharacterized protein
           NCU09758.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU09758.1 - Neurospora crassa
          Length = 1191

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 22/52 (42%), Positives = 31/52 (59%)
 Frame = +1

Query: 70  ISSARSPEPRLARVSVTKLLPLIPLIRTCPM*TSTRAIQVLSQMTVINSSVS 225
           +++A +P PR A + + K LP IPL+ T  + TS  AI+  S  T   SSVS
Sbjct: 560 VTTASTPAPRPASLELNKPLPDIPLVSTPVVETSQEAIED-SAPTENTSSVS 610


>UniRef50_Q29K42 Cluster: GA14551-PA; n=3; Drosophila|Rep:
           GA14551-PA - Drosophila pseudoobscura (Fruit fly)
          Length = 241

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 257 NGEVKNHRAAETVVNNNGKVTKYKVEN 337
           NG+  + R A+T VN+NGKVT Y   +
Sbjct: 215 NGDGTSRRGAQTTVNDNGKVTSYSTHS 241


>UniRef50_Q7RJ00 Cluster: Putative uncharacterized protein PY03466;
            n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY03466 - Plasmodium yoelii yoelii
          Length = 1860

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 251  EHNGEVKNHRAAETVVNNNGKVTKYKVEN*TNKISNKIKFLYAIFSDPR 397
            +HN   KN+R +   +NNN  +  +K E   +K+ N+  F +  F D +
Sbjct: 1605 DHNNLTKNNRRS-IYINNNNNIQNFKREIEQDKLFNQTNFSFHTFEDDK 1652


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,040,846
Number of Sequences: 1657284
Number of extensions: 9942771
Number of successful extensions: 25003
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24992
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)