Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0423
(751 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060741-1|AAL28289.1| 287|Drosophila melanogaster GH19142p pro... 34 0.18
AE014134-3076|AAN11033.1| 287|Drosophila melanogaster CG17549-P... 34 0.18
AE014134-3075|AAF53789.2| 262|Drosophila melanogaster CG17549-P... 34 0.18
AE014134-3074|AAF53788.1| 262|Drosophila melanogaster CG17549-P... 34 0.18
AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB... 29 6.8
AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD... 29 6.8
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA... 29 6.8
AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p pro... 29 8.9
AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protei... 29 8.9
AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9 signalo... 29 8.9
AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA... 29 8.9
>AY060741-1|AAL28289.1| 287|Drosophila melanogaster GH19142p
protein.
Length = 287
Score = 34.3 bits (75), Expect = 0.18
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 257 NGEVKNHRAAETVVNNNGKVTKYKVEN 337
NG+ + R A+T VN+NGK+T Y V +
Sbjct: 261 NGDGTSRRGAQTTVNDNGKITSYSVHS 287
>AE014134-3076|AAN11033.1| 287|Drosophila melanogaster CG17549-PA,
isoform A protein.
Length = 287
Score = 34.3 bits (75), Expect = 0.18
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 257 NGEVKNHRAAETVVNNNGKVTKYKVEN 337
NG+ + R A+T VN+NGK+T Y V +
Sbjct: 261 NGDGTSRRGAQTTVNDNGKITSYSVHS 287
>AE014134-3075|AAF53789.2| 262|Drosophila melanogaster CG17549-PC,
isoform C protein.
Length = 262
Score = 34.3 bits (75), Expect = 0.18
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 257 NGEVKNHRAAETVVNNNGKVTKYKVEN 337
NG+ + R A+T VN+NGK+T Y V +
Sbjct: 236 NGDGTSRRGAQTTVNDNGKITSYSVHS 262
>AE014134-3074|AAF53788.1| 262|Drosophila melanogaster CG17549-PB,
isoform B protein.
Length = 262
Score = 34.3 bits (75), Expect = 0.18
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 257 NGEVKNHRAAETVVNNNGKVTKYKVEN 337
NG+ + R A+T VN+NGK+T Y V +
Sbjct: 236 NGDGTSRRGAQTTVNDNGKITSYSVHS 262
>AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB,
isoform B protein.
Length = 1374
Score = 29.1 bits (62), Expect = 6.8
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 10 LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 105
L+ +PDSP N++P T SS+++P P+LA
Sbjct: 403 LLPPKPDSPVNTTP-TPTPNPSSSQAPTPQLA 433
>AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD,
isoform D protein.
Length = 1450
Score = 29.1 bits (62), Expect = 6.8
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 10 LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 105
L+ +PDSP N++P T SS+++P P+LA
Sbjct: 479 LLPPKPDSPVNTTP-TPTPNPSSSQAPTPQLA 509
>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
isoform A protein.
Length = 2786
Score = 29.1 bits (62), Expect = 6.8
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 10 LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 105
L+ +PDSP N++P T SS+++P P+LA
Sbjct: 1815 LLPPKPDSPVNTTP-TPTPNPSSSQAPTPQLA 1845
>AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p
protein.
Length = 525
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 415 HNKISNTSLITFWSLKFSKIMAKHFLISNFIHIIFNYKMTRSNI 546
H ++ + + K K+ AKHFL +NF H F ++ SN+
Sbjct: 275 HTRLECAAGLAELQQKKYKVAAKHFLNANFDHCDFPEMISTSNV 318
>AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protein
protein.
Length = 1462
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 10 LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 105
L+ +PDSP N++P T SS+++P P LA
Sbjct: 491 LLPPKPDSPVNTTP-TPTPNPSSSQAPTPHLA 521
>AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9
signalosome subunit 1 CSN1 protein.
Length = 525
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 415 HNKISNTSLITFWSLKFSKIMAKHFLISNFIHIIFNYKMTRSNI 546
H ++ + + K K+ AKHFL +NF H F ++ SN+
Sbjct: 275 HTRLECAAGLAELQQKKYKVAAKHFLNANFDHCDFPEMISTSNV 318
>AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA
protein.
Length = 525
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 415 HNKISNTSLITFWSLKFSKIMAKHFLISNFIHIIFNYKMTRSNI 546
H ++ + + K K+ AKHFL +NF H F ++ SN+
Sbjct: 275 HTRLECAAGLAELQQKKYKVAAKHFLNANFDHCDFPEMISTSNV 318
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,771,412
Number of Sequences: 53049
Number of extensions: 442557
Number of successful extensions: 1013
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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