Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0422
         (430 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22UC0 Cluster: Putative uncharacterized protein; n=1; ...    35   0.82 
UniRef50_Q22UB9 Cluster: Von Willebrand factor type A domain con...    35   0.82 
UniRef50_Q5UQC1 Cluster: Putative serine/threonine-protein kinas...    33   1.9  
UniRef50_Q4S0U4 Cluster: Chromosome undetermined SCAF14779, whol...    31   7.7  
UniRef50_Q17PF2 Cluster: Putative uncharacterized protein; n=2; ...    31   7.7  
UniRef50_A2D7T5 Cluster: Ankyrin repeat protein, putative; n=21;...    31   7.7  

>UniRef50_Q22UC0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2382

 Score = 34.7 bits (76), Expect = 0.82
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = -2

Query: 171 SIRNFQRSTLIFKCSHNKISNTSLITFWSLKFSKIMAKHFLISNFIQY 28
           ++ N+    L+F CSHN  +   LI+F  LK  K++ KH L S  IQY
Sbjct: 505 NLENYYIQLLLFACSHNDETKLKLISF-ILK--KVLLKHQLESEQIQY 549


>UniRef50_Q22UB9 Cluster: Von Willebrand factor type A domain
           containing protein; n=6; Tetrahymena thermophila
           SB210|Rep: Von Willebrand factor type A domain
           containing protein - Tetrahymena thermophila SB210
          Length = 2301

 Score = 34.7 bits (76), Expect = 0.82
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = -2

Query: 171 SIRNFQRSTLIFKCSHNKISNTSLITFWSLKFSKIMAKHFLISNFIQY 28
           ++ N+    L+F CSHN  +   LI+F  LK  K++ KH L S  IQY
Sbjct: 432 NLENYYIQLLLFACSHNDETKLKLISF-ILK--KVLLKHQLESEQIQY 476


>UniRef50_Q5UQC1 Cluster: Putative serine/threonine-protein kinase
           L232; n=1; Acanthamoeba polyphaga mimivirus|Rep:
           Putative serine/threonine-protein kinase L232 -
           Mimivirus
          Length = 633

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -3

Query: 191 ISNKIKFLYAIFSDPR*FSNVRIIKSLIPA*LHFGL*SFQKLWLNIF*YPILF--NIIF 21
           I    K  Y I ++     N  II+S+IP+ + F   SF KLW ++  Y  LF  N++F
Sbjct: 303 IKQSRKLFYEILANKYPIYNSPIIQSIIPSTISFREFSFHKLWSSMNNYDYLFKSNLLF 361


>UniRef50_Q4S0U4 Cluster: Chromosome undetermined SCAF14779, whole
           genome shotgun sequence; n=3; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14779, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 586

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = -3

Query: 428 SVTKLLPLIPLIRTCPSEQVHELFRCSAK*R*SIRQCLVFFVLLVCERQRRGQE 267
           S  +L PL PL++  P  ++H+LF C       ++QC V F  L C    +G+E
Sbjct: 53  SQVELTPL-PLLKDAPVAELHDLF-CK-----KLQQCCVMFDFLDCVADLKGKE 99


>UniRef50_Q17PF2 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 241

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 275 GQESQSCETVVNNNGKVTKYKVEN 204
           GQ  +   T VN+NGKVT Y V N
Sbjct: 218 GQSHREASTTVNDNGKVTTYHVRN 241


>UniRef50_A2D7T5 Cluster: Ankyrin repeat protein, putative; n=21;
           Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
           putative - Trichomonas vaginalis G3
          Length = 216

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -1

Query: 289 NDNGEVKNHRAAKQLSITTEKSPSIKSKTKLIRSQIKLNFYTQFS 155
           NDN    NH+  KQ    +    +I S  K  +S  ++N Y  FS
Sbjct: 30  NDNNNNNNHKETKQFDKISTTDENINSFEKYWKSNHRINIYPTFS 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,787,692
Number of Sequences: 1657284
Number of extensions: 5667729
Number of successful extensions: 12185
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12183
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)