Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0422
         (430 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   2.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
 Frame = -2

Query: 174 ISIRNFQRSTLIFKCSHNKISNTSLITF-----WSLKFSK 70
           +S  NF+  + +  CS+  + + S  TF     W + FSK
Sbjct: 101 VSNNNFKTYSNVTTCSYYSLDDLSEDTFYDIRLWGVSFSK 140


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 269 ESQSCETVVNNNGKVTKYKVEN*TNK 192
           E+Q C T   N+     YK++   NK
Sbjct: 430 ENQDCSTPTENSPTKPYYKLKTANNK 455


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 324  TN*LPSFG*APE*LVYLFTWACSD 395
            TN +P+        +  F+WAC+D
Sbjct: 1022 TNNIPTNAGTTPGAILAFSWACND 1045


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -3

Query: 404 IPLIRTCPSEQVHE 363
           +P+++  PS+ +HE
Sbjct: 446 LPVLKNMPSQYIHE 459


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 109 YQLDYILVFKVFKNY 65
           + ++Y LVF V K Y
Sbjct: 349 FPINYTLVFSVLKQY 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,612
Number of Sequences: 336
Number of extensions: 1518
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)