Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0422
         (430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   7.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.7  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   7.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.7  

>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = -3

Query: 287 RQRRGQESQSCETVVNNNGKVTKYKVEN*TNKISNKIKFLYAI 159
           R+R   +     + ++NN   + Y   N  N  +N  K  Y I
Sbjct: 71  RERERSKEPKIVSSLSNNYNYSNYNNYNNNNNYNNYKKLYYNI 113


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 386 CPSEQVHELFRC 351
           CP+  V E+ RC
Sbjct: 261 CPTRNVKEMIRC 272


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 386 CPSEQVHELFRC 351
           CP+  V E+ RC
Sbjct: 132 CPTRNVKEMIRC 143


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 386 CPSEQVHELFRC 351
           CP+  V E+ RC
Sbjct: 261 CPTRNVKEMIRC 272


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,421
Number of Sequences: 438
Number of extensions: 1711
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)