Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0415
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   1.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   1.9  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   3.3  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   4.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.8  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 400 LISHVLIYNTIGYYNFK*IDNC*C 471
           L + +L+++T GYY+   + NC C
Sbjct: 199 LQADMLLWHTFGYYHILAMLNCLC 222


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 400 LISHVLIYNTIGYYNFK*IDNC*C 471
           L + +L+++T GYY+   + NC C
Sbjct: 199 LQADMLLWHTFGYYHILAMLNCLC 222


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 264 NEYEISFNMYSELTFTQLHSSAF 332
           +E E  FN + E+    LH S F
Sbjct: 97  HELETKFNPHHEIKLQHLHQSKF 119


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +3

Query: 57  SH-CNFGLSSGTNIAEHG 107
           SH CN+G ++ TNI  +G
Sbjct: 209 SHLCNWGSANSTNIVSNG 226


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +3

Query: 57  SH-CNFGLSSGTNIAEHG 107
           SH CN+G ++ TNI  +G
Sbjct: 369 SHLCNWGSANSTNIVSNG 386


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +3

Query: 57  SH-CNFGLSSGTNIAEHG 107
           SH CN+G ++ TNI  +G
Sbjct: 369 SHLCNWGSANSTNIVSNG 386


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 207 YITYKCSVVHQIKKM 251
           YI+++  V H++KKM
Sbjct: 154 YISFESKVFHKLKKM 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,740
Number of Sequences: 336
Number of extensions: 2710
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)