Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0415
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   3.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.3  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -1

Query: 307 NVNSEYMLKLISYSLPLNNIFFI*CTTLHLYVIYIYML 194
           N + E+MLKLI+  + +N + F+    L L  I IY+L
Sbjct: 135 NRSREFMLKLIAIRMLVNLVVFV---ILLLAAITIYVL 169


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 397  YCHFHNVHSVRLIHL 353
            YC + NVH  +L HL
Sbjct: 1702 YCRYDNVHEGKLSHL 1716


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 301  NSEYMLKLISYSLPLNN 251
            N++Y+LKL S   PLNN
Sbjct: 979  NNKYVLKLKSMKGPLNN 995


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,886
Number of Sequences: 2352
Number of extensions: 9581
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)