Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0413
         (683 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    81   2e-14
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    50   5e-05
UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3; ...    34   2.8  
UniRef50_Q22BD8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_Q5AWK9 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 81.0 bits (191), Expect = 2e-14
 Identities = 39/53 (73%), Positives = 43/53 (81%)
 Frame = +2

Query: 242 PGRHLVPQLISKKPILLYKINLKQSKGIRPTGDTSKEKQNYCFYLIPSIFIFI 400
           P   +VPQ I+K+P  LYKINLKQ+KGIR TGDTSKEKQN  FYLIP IFIFI
Sbjct: 25  PADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFYLIPRIFIFI 77


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -3

Query: 483 LKLENGWTDLANFGLELFVEVQRRFKM 403
           LKLENGWTDLANFGLEL VEVQR  K+
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLKV 46


>UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1834

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +2

Query: 269  ISKKPILLYKINLKQSKGIRPTGDTSKEKQNYCFYLIPSIF--IFIYILNLLWTSTNNS 439
            + K  I +   N+     I  +G  SK     CFY+ PSIF  IF Y+ N +    N S
Sbjct: 1633 LKKMDIFVKTFNINSLNSICESGFNSKSAFFLCFYMTPSIFANIFYYLNNNITAIVNES 1691


>UniRef50_Q22BD8 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 4414

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
 Frame = -3

Query: 516  LYKMNCCSLVSLKLENGWTDLANFGLELFVEVQRRFKM-*INMKMLGI----K*KQ*FCF 352
            LY +NC + +  +  +  T +AN+ LEL VE Q +F++  + +K + I    K K  F  
Sbjct: 3323 LYSINCLTYLKTETVSDITTVANWSLELLVENQNKFQIKTVEVKQVEIDPQGKLKFQFEE 3382

Query: 351  SFDVSPVGRIPFDCFKFILYKSIGFL 274
            S  + P+  + F   KFIL ++  F+
Sbjct: 3383 SLQLQPI-YVKFIYKKFILNQTKNFM 3407


>UniRef50_Q5AWK9 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 756

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +2

Query: 215 KINV*NTS*PGRHLVPQLISKKPILLYKINLKQSKGIRPTGDTSKEKQNYCFYLIPSIFI 394
           ++ V  +S PG H +P +I    + L+ I L      + +GD     + +C++LIPS+ +
Sbjct: 454 RLQVQRSSRPG-HALPAVILHIQMSLHPIPLSSYLSQQHSGDPQTLLRRHCYHLIPSLKL 512

Query: 395 FIYILN 412
            + I++
Sbjct: 513 ILNIIS 518


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,878,491
Number of Sequences: 1657284
Number of extensions: 12829203
Number of successful extensions: 26805
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26799
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)