Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0413
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.58 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.58 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    24   1.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   3.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.1  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +2

Query: 269 ISKKPILLYKINLKQSKGIRPTGDTSKEKQNYCFYLIPSIFIFIY 403
           ++KKP L +K+ LK  K ++   +  +EK +YC ++  + F + Y
Sbjct: 87  LTKKP-LWFKL-LKNLKMVQ-NHNNIREKSHYCLFVASNCFFWSY 128


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +2

Query: 269 ISKKPILLYKINLKQSKGIRPTGDTSKEKQNYCFYLIPSIFIFIY 403
           ++KKP L +K+ LK  K ++   +  +EK +YC ++  + F + Y
Sbjct: 87  LTKKP-LWFKL-LKNLKMVQ-NHNNIREKSHYCLFVASNCFFWSY 128


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 296 KINLKQSKGIRPTGDTSKEKQNYCF 370
           K+     K +R  GD SK K  Y F
Sbjct: 342 KLTTAAGKHLRKVGDPSKRKGTYAF 366


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 371 YLIPSIFIFIYILNLLWTSTNNSRPKF 451
           YLI +I+  +Y L +LW+ T+ + P+F
Sbjct: 243 YLIWTIYE-MYHLAILWSCTSTNCPRF 268


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 138 KYFLDACKSVSYRTKQKQFSVIYNFRYRNRD*NVGF 31
           K+F+ A  S  +     +F+V   +RYR R  N GF
Sbjct: 255 KHFVGADNSTVF-VPTARFTVEQGYRYRFRVINAGF 289


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = +1

Query: 301  KLKTIKRNPSDGGHIKRKTKLLFLFNSEHFHI 396
            +L  I++     GHI R+  +      +H H+
Sbjct: 1147 RLDHIEKTIDPSGHISRRRSMSASSRGDHHHL 1178


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = +1

Query: 301  KLKTIKRNPSDGGHIKRKTKLLFLFNSEHFHI 396
            +L  I++     GHI R+  +      +H H+
Sbjct: 1147 RLDHIEKTIDPSGHISRRRSMSASSRGDHHHL 1178


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = +1

Query: 301  KLKTIKRNPSDGGHIKRKTKLLFLFNSEHFHI 396
            +L  I++     GHI R+  +      +H H+
Sbjct: 1147 RLDHIEKTIDPSGHISRRRSMSASSRGDHHHL 1178


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = +1

Query: 301  KLKTIKRNPSDGGHIKRKTKLLFLFNSEHFHI 396
            +L  I++     GHI R+  +      +H H+
Sbjct: 1147 RLDHIEKTIDPSGHISRRRSMSASSRGDHHHL 1178


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -3

Query: 534 IYFLIYLYKMNCCSLV 487
           IY+  Y++ + CC+ +
Sbjct: 258 IYYFYYMHLLFCCAFI 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,264
Number of Sequences: 336
Number of extensions: 3850
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)