Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0412
         (473 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   107   3e-25
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   3.1  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    22   9.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  107 bits (256), Expect = 3e-25
 Identities = 53/85 (62%), Positives = 55/85 (64%)
 Frame = +2

Query: 2   SHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGP 181
           SHELPRYGVKVGLTNYAAAY TG                          EY VEPVD GP
Sbjct: 80  SHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGP 139

Query: 182 GAFRCYLDVGLARTTTGARVFGAMR 256
            AFRCYLDVGLARTTTG+RVFGAM+
Sbjct: 140 AAFRCYLDVGLARTTTGSRVFGAMK 164



 Score = 76.2 bits (179), Expect = 5e-16
 Identities = 31/43 (72%), Positives = 37/43 (86%)
 Frame = +1

Query: 253 EGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGCMLLN 381
           +GAVDGGLN+PHS+KRFPGY AE+K FNAE+HR HIFG  + N
Sbjct: 164 KGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVAN 206



 Score = 60.9 bits (141), Expect = 2e-11
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = +3

Query: 366 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIE 473
           LHVA YMR+LE++DE++FKRQFSKYI LG+ AD IE
Sbjct: 202 LHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIE 237


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 108 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 191
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 211 AYIQITSKCSWSIVDRF 161
           A I   + C W+++DRF
Sbjct: 307 ALIAAVAACLWAVLDRF 323


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,003
Number of Sequences: 2352
Number of extensions: 8442
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)