Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0412
         (473 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...    76   2e-14
U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical pr...    30   0.98 
AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical ...    30   0.98 
AC006769-12|AAF60591.1|  384|Caenorhabditis elegans Hypothetical...    30   0.98 
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ...    27   5.2  
Z46267-16|CAO78720.1|  576|Caenorhabditis elegans Hypothetical p...    27   6.9  
Z46267-4|CAD45594.1|  517|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z46267-3|CAA86421.3|  522|Caenorhabditis elegans Hypothetical pr...    27   6.9  
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    27   6.9  
Z92777-9|CAJ58495.1|  396|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AC006680-6|AAK72300.1|  335|Caenorhabditis elegans Serpentine re...    27   9.1  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 38/85 (44%), Positives = 48/85 (56%)
 Frame = +2

Query: 2   SHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGP 181
           SHELPRYG+KVGLTNYAAAY+TG                          +YNVE  +   
Sbjct: 80  SHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDR 138

Query: 182 GAFRCYLDVGLARTTTGARVFGAMR 256
             F+  LD+GLARTTTG+++F  M+
Sbjct: 139 APFKAVLDIGLARTTTGSKIFAVMK 163



 Score = 55.6 bits (128), Expect = 2e-08
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +1

Query: 253 EGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFG 366
           +G  DGG+NVPHS  RF G+D ESK++NAE HR  I G
Sbjct: 163 KGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILG 200



 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 18/32 (56%), Positives = 26/32 (81%)
 Frame = +3

Query: 369 HVAEYMRSLEQDDEDSFKRQFSKYIKLGVTAD 464
           HVA+YM  L+++DED +KRQFSK++  G+ AD
Sbjct: 202 HVADYMTYLKEEDEDRYKRQFSKFLAAGLNAD 233


>U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical
           protein R05G6.2 protein.
          Length = 339

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 357 HLWLHVAEYMRSLEQDDEDSFKRQFSKY 440
           HL+L +++YMR  + DDE+  K + S +
Sbjct: 279 HLFLSLSDYMRDKQFDDEEHLKTELSTF 306


>AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical
           protein Y49F6A.4 protein.
          Length = 514

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 357 HLWLHVAEYMRSLEQDDEDSFKRQFSKY 440
           HL+L +++YMR  + DDE+  K + S +
Sbjct: 254 HLFLSLSDYMRDKQFDDEEHLKTELSTF 281


>AC006769-12|AAF60591.1|  384|Caenorhabditis elegans Hypothetical
           protein Y45G12C.13 protein.
          Length = 384

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 357 HLWLHVAEYMRSLEQDDEDSFKRQFSKY 440
           HL+L +++YMR  + DDE+  K + S +
Sbjct: 279 HLFLSLSDYMRDKQFDDEEHLKTELSTF 306


>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
           protein M01E10.2 protein.
          Length = 1286

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = -3

Query: 312 IARESFDGMRNIE---ATVNSTLIAPKTRAPVVVRAKPTS 202
           +  E FD +R I+    T  +T   P TR P   R  PT+
Sbjct: 215 LIEEGFDEVRKIDQETTTTTTTKAPPTTRTPPTTRTPPTT 254


>Z46267-16|CAO78720.1|  576|Caenorhabditis elegans Hypothetical
           protein F49E2.2c protein.
          Length = 576

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -3

Query: 411 PHHPVQDFSCIQQHATKDVSPVYFSIELFGFCIIARESFDGMRNIEATVN 262
           P H  Q  S  + H+T    P +F+   +G  +I  + F+     + TVN
Sbjct: 493 PSHQAQQHS--RNHSTDISVPSFFNPSQYGSILIVNDDFNASSGEQMTVN 540


>Z46267-4|CAD45594.1|  517|Caenorhabditis elegans Hypothetical
           protein F49E2.2b protein.
          Length = 517

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -3

Query: 411 PHHPVQDFSCIQQHATKDVSPVYFSIELFGFCIIARESFDGMRNIEATVN 262
           P H  Q  S  + H+T    P +F+   +G  +I  + F+     + TVN
Sbjct: 434 PSHQAQQHS--RNHSTDISVPSFFNPSQYGSILIVNDDFNASSGEQMTVN 481


>Z46267-3|CAA86421.3|  522|Caenorhabditis elegans Hypothetical
           protein F49E2.2a protein.
          Length = 522

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -3

Query: 411 PHHPVQDFSCIQQHATKDVSPVYFSIELFGFCIIARESFDGMRNIEATVN 262
           P H  Q  S  + H+T    P +F+   +G  +I  + F+     + TVN
Sbjct: 439 PSHQAQQHS--RNHSTDISVPSFFNPSQYGSILIVNDDFNASSGEQMTVN 486


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 155 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMRVL 262
           N EP++   G F C+L       TT+G+R  G    L
Sbjct: 68  NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCL 104


>Z92777-9|CAJ58495.1|  396|Caenorhabditis elegans Hypothetical
           protein C17H1.14 protein.
          Length = 396

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +1

Query: 313 DAESKKFNAEVHRAHIFGCMLLNT*EVLNRMMRILSRDNSAST 441
           D    KFN  V R    GC L +  E+LN  +  L  ++   T
Sbjct: 231 DILENKFNRAVQRTKRAGCSLSDAMEILNESIGSLQDEDGEQT 273


>Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical
           protein R09D1.7 protein.
          Length = 369

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 247 SYEGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRA 354
           ++ G V G  N+   + +  GYD     FN+E+  A
Sbjct: 266 TFNGTVFGEANMSRKLVQQEGYDLSHPTFNSEIRAA 301


>AC006680-6|AAK72300.1|  335|Caenorhabditis elegans Serpentine
           receptor, class j protein13 protein.
          Length = 335

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 197 YLDVGLARTTTGARVFGAMRVLLTVASMFLIPS 295
           YLD+G+     G   F A   L  +A MFL+P+
Sbjct: 274 YLDLGMWNNYFGVIAFSAFPFLDPLAIMFLLPN 306


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,206,046
Number of Sequences: 27780
Number of extensions: 192984
Number of successful extensions: 508
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)