Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0397
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.80 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   3.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   5.7  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   9.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.9  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 447 WINEIPTVPI 418
           W+NEIPT+P+
Sbjct: 321 WLNEIPTMPV 330


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 203 YYRPRTASAQPSK 241
           YYRPRT+  +P +
Sbjct: 232 YYRPRTSRTEPPR 244


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 52  ALFFDRCTAPVKLPAWQC 105
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 52  ALFFDRCTAPVKLPAWQC 105
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
 Frame = -3

Query: 605 CDGLRGC*RNVISAQCSECQREEIQASAGKR-RGNYDSLKVAKCL 474
           C+G +G  +  +    S   REE      KR R      +  KCL
Sbjct: 103 CEGCKGFFKRTVRKDLSYACREEKNCIIDKRQRNRCQYCRYQKCL 147


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 474 RHLISDAHEWINEI 433
           RHLI    +W NE+
Sbjct: 91  RHLIDHKRDWWNEL 104


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = -3

Query: 134  LKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKP 15
            L  PR P   H  +     A   S + +G  R     +KP
Sbjct: 916  LTSPRQPAETHAGSPCRNSASPASSDRSGTPRSTNGDRKP 955


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,262
Number of Sequences: 336
Number of extensions: 3595
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)