Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0397
(712 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for ... 31 4.1
M14058-1|AAA51851.1| 705|Homo sapiens C1R protein. 31 4.1
BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1,... 31 4.1
BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open read... 31 4.1
AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein. 31 4.1
AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein. 31 4.1
AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of compl... 31 4.1
BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein. 31 5.4
BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein. 31 5.4
BC110451-1|AAI10452.1| 1042|Homo sapiens corin, serine peptidase... 31 5.4
AF133845-1|AAD31850.1| 1042|Homo sapiens corin protein. 31 5.4
AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein. 31 5.4
BC126405-1|AAI26406.1| 1613|Homo sapiens low density lipoprotein... 30 7.1
BC117136-1|AAI17137.1| 1613|Homo sapiens low density lipoprotein... 30 7.1
AF074264-1|AAC33006.1| 1613|Homo sapiens LDL receptor-related pr... 30 7.1
AB209683-1|BAD92920.1| 1477|Homo sapiens low density lipoprotein... 30 7.1
>X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for
complement component C1r. ).
Length = 705
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 445 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 335
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>M14058-1|AAA51851.1| 705|Homo sapiens C1R protein.
Length = 705
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 445 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 335
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1, r
subcomponent protein.
Length = 705
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 445 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 335
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open reading
frame 24 protein.
Length = 449
Score = 31.1 bits (67), Expect = 4.1
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Frame = +3
Query: 66 QMYRPSQTPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR--- 236
Q+ + S PR A + TR AT+ + +SP+ T + + +P+PP R
Sbjct: 194 QVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQA 253
Query: 237 ---VSNETM-K*WFFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 392
+S ++ + + +++ P+ TP +P + ++ + P SP PVP
Sbjct: 254 QGPISQVSVDQPVVNTTNKSTPMPSNTTPEPAPTPTVVTTTKAQAREPTASPVPVP 309
>AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein.
Length = 449
Score = 31.1 bits (67), Expect = 4.1
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Frame = +3
Query: 66 QMYRPSQTPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR--- 236
Q+ + S PR A + TR AT+ + +SP+ T + + +P+PP R
Sbjct: 194 QVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQA 253
Query: 237 ---VSNETM-K*WFFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 392
+S ++ + + +++ P+ TP +P + ++ + P SP PVP
Sbjct: 254 QGPISQVSVDQPVVNTTNKSTPMPSNTTPEPAPTPTVVTTTKAQAREPTASPVPVP 309
>AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein.
Length = 449
Score = 31.1 bits (67), Expect = 4.1
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Frame = +3
Query: 66 QMYRPSQTPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR--- 236
Q+ + S PR A + TR AT+ + +SP+ T + + +P+PP R
Sbjct: 194 QVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQA 253
Query: 237 ---VSNETM-K*WFFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 392
+S ++ + + +++ P+ TP +P + ++ + P SP PVP
Sbjct: 254 QGPISQVSVDQPVVNTTNKSTPMPSNTTPEPAPTPTVVTTTKAQAREPTASPVPVP 309
>AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of
complement component 1 protein.
Length = 705
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 445 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 335
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein.
Length = 1768
Score = 30.7 bits (66), Expect = 5.4
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +3
Query: 153 ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMK*WFFSDDRAKRS--PTYATPLMSPY 326
A +PL LG K PADI+ P R E++ + RA+ S +++ P Y
Sbjct: 1030 AKTPLSALGLKPHNPADIL-LHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAY 1088
Query: 327 NAR--LESSSTGSSFPADSPKPVPLAVVSLDS 416
L + + G SF + SP ++S DS
Sbjct: 1089 GHEIPLRNGTLGGSFVSPSPLSTSSPILSADS 1120
>BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein.
Length = 1713
Score = 30.7 bits (66), Expect = 5.4
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +3
Query: 153 ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMK*WFFSDDRAKRS--PTYATPLMSPY 326
A +PL LG K PADI+ P R E++ + RA+ S +++ P Y
Sbjct: 975 AKTPLSALGLKPHNPADIL-LHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAY 1033
Query: 327 NAR--LESSSTGSSFPADSPKPVPLAVVSLDS 416
L + + G SF + SP ++S DS
Sbjct: 1034 GHEIPLRNGTLGGSFVSPSPLSTSSPILSADS 1065
>BC110451-1|AAI10452.1| 1042|Homo sapiens corin, serine peptidase
protein.
Length = 1042
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -3
Query: 650 WHGQGESDCLIKTKHCDGLRGC*RNVISAQCSECQREEIQAS 525
W CL T CDG C + CS CQ +E++ +
Sbjct: 622 WECPSNKQCLKHTVICDGFPDCPDYMDEKNCSFCQDDELECA 663
>AF133845-1|AAD31850.1| 1042|Homo sapiens corin protein.
Length = 1042
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -3
Query: 650 WHGQGESDCLIKTKHCDGLRGC*RNVISAQCSECQREEIQAS 525
W CL T CDG C + CS CQ +E++ +
Sbjct: 622 WECPSNKQCLKHTVICDGFPDCPDYMDEKNCSFCQDDELECA 663
>AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein.
Length = 873
Score = 30.7 bits (66), Expect = 5.4
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +3
Query: 153 ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMK*WFFSDDRAKRS--PTYATPLMSPY 326
A +PL LG K PADI+ P R E++ + RA+ S +++ P Y
Sbjct: 135 AKTPLSALGLKPHNPADIL-LHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAY 193
Query: 327 NAR--LESSSTGSSFPADSPKPVPLAVVSLDS 416
L + + G SF + SP ++S DS
Sbjct: 194 GHEIPLRNGTLGGSFVSPSPLSTSSPILSADS 225
>BC126405-1|AAI26406.1| 1613|Homo sapiens low density lipoprotein
receptor-related protein 6 protein.
Length = 1613
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 638 GESDCLIKTKHCDGLRGC*RNVISAQCSECQREEIQASAGK 516
GE DC+ CDG C + C C + Q ++G+
Sbjct: 1259 GEIDCIPVAWRCDGFTECEDHSDELNCPVCSESQFQCASGQ 1299
>BC117136-1|AAI17137.1| 1613|Homo sapiens low density lipoprotein
receptor-related protein 6 protein.
Length = 1613
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 638 GESDCLIKTKHCDGLRGC*RNVISAQCSECQREEIQASAGK 516
GE DC+ CDG C + C C + Q ++G+
Sbjct: 1259 GEIDCIPVAWRCDGFTECEDHSDELNCPVCSESQFQCASGQ 1299
>AF074264-1|AAC33006.1| 1613|Homo sapiens LDL receptor-related protein
6 protein.
Length = 1613
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 638 GESDCLIKTKHCDGLRGC*RNVISAQCSECQREEIQASAGK 516
GE DC+ CDG C + C C + Q ++G+
Sbjct: 1259 GEIDCIPVAWRCDGFTECEDHSDELNCPVCSESQFQCASGQ 1299
>AB209683-1|BAD92920.1| 1477|Homo sapiens low density lipoprotein
receptor-related protein 6 variant protein.
Length = 1477
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 638 GESDCLIKTKHCDGLRGC*RNVISAQCSECQREEIQASAGK 516
GE DC+ CDG C + C C + Q ++G+
Sbjct: 1123 GEIDCIPVAWRCDGFTECEDHSDELNCPVCSESQFQCASGQ 1163
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,392,463
Number of Sequences: 237096
Number of extensions: 2430699
Number of successful extensions: 5907
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5903
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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