Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0396
(779 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 179 3e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 170 1e-44
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 157 1e-40
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 105 5e-25
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 26 0.45
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 26 0.45
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 26 0.45
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.2
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 179 bits (435), Expect = 3e-47
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +3
Query: 3 APANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADF 182
APA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADF
Sbjct: 281 APAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADF 340
Query: 183 TAQVIVLNHPGQISNGYTPVLDCH 254
TAQVIVLNHPGQISNGYTPVLDCH
Sbjct: 341 TAQVIVLNHPGQISNGYTPVLDCH 364
Score = 151 bits (367), Expect = 5e-39
Identities = 71/83 (85%), Positives = 76/83 (91%)
Frame = +2
Query: 257 AHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFA 436
AHIACKFA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFA
Sbjct: 366 AHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFA 425
Query: 437 VRDMRQTVAVGVIKAVNFKEAGG 505
VRDMRQTVAVGVIKAV FK+A G
Sbjct: 426 VRDMRQTVAVGVIKAVTFKDAAG 448
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 170 bits (414), Expect = 1e-44
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +3
Query: 3 APANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADF 182
APA +TTEVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADF
Sbjct: 281 APAALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADF 340
Query: 183 TAQVIVLNHPGQISNGYTPVLDCH 254
TAQVIVLNHPGQISNGYTPVLDCH
Sbjct: 341 TAQVIVLNHPGQISNGYTPVLDCH 364
Score = 149 bits (361), Expect = 3e-38
Identities = 70/83 (84%), Positives = 76/83 (91%)
Frame = +2
Query: 257 AHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFA 436
AHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFA
Sbjct: 366 AHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFA 425
Query: 437 VRDMRQTVAVGVIKAVNFKEAGG 505
VRDMRQTVAVGVIK+V FK+ G
Sbjct: 426 VRDMRQTVAVGVIKSVTFKDTQG 448
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 157 bits (380), Expect = 1e-40
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = +3
Query: 30 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 209
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 210 PGQISNGYTPVLDCH 254
PGQISNGYTPVLDCH
Sbjct: 61 PGQISNGYTPVLDCH 75
Score = 78.2 bits (184), Expect = 8e-17
Identities = 37/43 (86%), Positives = 39/43 (90%)
Frame = +2
Query: 257 AHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 385
AHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 77 AHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 105 bits (252), Expect = 5e-25
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 3 APANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 155
APA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 224 APAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 25.8 bits (54), Expect = 0.45
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 596 KYRSCMKNCAVNSSSYFLPLVAFSAALVTCH 504
K+ C+KN A SSYF+ + F+ C+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFNLIDTKCY 124
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 25.8 bits (54), Expect = 0.45
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 596 KYRSCMKNCAVNSSSYFLPLVAFSAALVTCH 504
K+ C+KN A SSYF+ + F+ C+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFNLIDTKCY 129
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 25.8 bits (54), Expect = 0.45
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 596 KYRSCMKNCAVNSSSYFLPLVAFSAALVTCH 504
K+ C+KN A SSYF+ + F+ C+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFNLIDTKCY 129
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 635 CSPFFLRNTFR*MKYRSCMKN 573
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 108 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 215
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,151
Number of Sequences: 438
Number of extensions: 4783
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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