Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0392
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   6.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   6.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.2  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 536 NGAIEWITECLL 501
           NG I+W T CL+
Sbjct: 14  NGLIDWYTVCLV 25


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +1

Query: 124 LQVDVLIF-KYWLYLVLWA 177
           LQV  + F  YWLYLVL A
Sbjct: 49  LQVLFVSFVSYWLYLVLEA 67


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +1

Query: 124 LQVDVLIF-KYWLYLVLWA 177
           LQV  + F  YWLYLVL A
Sbjct: 67  LQVLFVSFVSYWLYLVLEA 85


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 378 YFLTISCPLPTHSL*QYSMVFRL 446
           Y  TI+ PL    L  Y+M FR+
Sbjct: 323 YDSTITAPLSNPPLWPYTMYFRM 345


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,903
Number of Sequences: 336
Number of extensions: 3713
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)