Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0392
(772 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 42 6e-06
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 42 6e-06
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 39 6e-05
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 39 6e-05
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 36 3e-04
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 30 0.027
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 30 0.027
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 1.8
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 7.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 7.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 7.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 7.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 7.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.6
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 41.9 bits (94), Expect = 6e-06
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +3
Query: 501 QQTFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 602
+++FG+P D+P+ ++ PNM FK +L+YH+ E
Sbjct: 644 KRSFGFPLDKPLYDFNYEGPNMLFKDILIYHKDE 677
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 41.9 bits (94), Expect = 6e-06
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +3
Query: 501 QQTFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 602
+++FG+P D+P+ ++ PNM FK +L+YH+ E
Sbjct: 644 KRSFGFPLDKPLYDFNYEGPNMLFKDILIYHKDE 677
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 38.7 bits (86), Expect = 6e-05
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 423 QYSMVFRLSV*TDT*GVRAIQVCCSGQQT-----FGYPFDRPVLPQYFKQPNMFFKKVLV 587
+Y M F LS D ++ ++ G+ T FG+P DRP+ F PNM+FK V +
Sbjct: 617 RYKMFFFLSS-MDESNTKSYEIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPNMYFKDVFI 675
Query: 588 YH 593
Y+
Sbjct: 676 YN 677
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 38.7 bits (86), Expect = 6e-05
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 423 QYSMVFRLSV*TDT*GVRAIQVCCSGQQT-----FGYPFDRPVLPQYFKQPNMFFKKVLV 587
+Y M F LS D ++ ++ G+ T FG+P DRP+ F PNM+FK V +
Sbjct: 617 RYKMFFFLSS-MDESNTKSYEIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPNMYFKDVFI 675
Query: 588 YH 593
Y+
Sbjct: 676 YN 677
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 36.3 bits (80), Expect = 3e-04
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 513 GYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 602
G+P DRP+ PN+F K VLV+H+G+
Sbjct: 974 GFPLDRPLSLGALSVPNIFVKDVLVFHQGQ 1003
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 29.9 bits (64), Expect = 0.027
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 504 QTFGYPFDRPVLPQYFKQPNMFFKKVLVYH 593
+ G+P D+PV P N+ K+VLV+H
Sbjct: 644 RAMGFPLDKPVDPLLLVLSNIHVKEVLVHH 673
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 29.9 bits (64), Expect = 0.027
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 504 QTFGYPFDRPVLPQYFKQPNMFFKKVLVYH 593
+ G+P D+PV P N+ K+VLV+H
Sbjct: 644 RAMGFPLDKPVDPLLLVLSNIHVKEVLVHH 673
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 568 SSRRSWSTMKENYSPIYLTFLTIHQI 645
S+ +++ NY P+Y + I QI
Sbjct: 319 SNNYNYNNYNNNYKPLYYNIINIEQI 344
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 159 QPVLEDEYVDLQLQRSG 109
+PV+ +E VD L++SG
Sbjct: 168 KPVVAEETVDYMLEKSG 184
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.3
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 421 SSTPWCFVYPYEPTPKE---SEPFKSVVPDNKHSVIHSIAPFFLST 549
S PW + P + S PF +P N + S+ P F ST
Sbjct: 130 SMGPWISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPSLNPRFEST 175
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.3
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 421 SSTPWCFVYPYEPTPKE---SEPFKSVVPDNKHSVIHSIAPFFLST 549
S PW + P + S PF +P N + S+ P F ST
Sbjct: 130 SMGPWISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPSLNPRFEST 175
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 7.3
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 421 SSTPWCFVYPYEPTPKE---SEPFKSVVPDNKHSVIHSIAPFFLST 549
S PW + P + S PF +P N + S+ P F ST
Sbjct: 130 SMGPWISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPSLNPRFEST 175
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 7.3
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 421 SSTPWCFVYPYEPTPKE---SEPFKSVVPDNKHSVIHSIAPFFLST 549
S PW + P + S PF +P N + S+ P F ST
Sbjct: 363 SMGPWISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPSLNPRFEST 408
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 508 HSVIHSIAPFFLSTSNNLT 564
HSV+HS S+++N+T
Sbjct: 939 HSVLHSAQSVVASSASNVT 957
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,947
Number of Sequences: 438
Number of extensions: 4862
Number of successful extensions: 31
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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