Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0388
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.71 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.71 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   0.71 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   6.6  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 281 TRPSGRWCELPSAGLC 234
           ++ S + CE+PSAGLC
Sbjct: 97  SKKSCQGCEMPSAGLC 112


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 281 TRPSGRWCELPSAGLC 234
           ++ S + CE+PSAGLC
Sbjct: 45  SKKSCQGCEMPSAGLC 60


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 281 TRPSGRWCELPSAGLC 234
           ++ S + CE+PSAGLC
Sbjct: 228 SKKSCQGCEMPSAGLC 243


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 695 ALFFDRCTAPVKLPAWQC 748
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 695 ALFFDRCTAPVKLPAWQC 748
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 725 VKLPAWQCPRTGSAGVLNG 781
           V  P W C R  SA  + G
Sbjct: 50  VTTPRWGCARASSATTMGG 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,227
Number of Sequences: 336
Number of extensions: 4046
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)