Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0388
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MG... 42 0.003
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 8.6
BC036890-1|AAH36890.1| 555|Homo sapiens GRHL3 protein protein. 30 8.6
AY231160-1|AAO67370.1| 607|Homo sapiens sister-of-mammalian gra... 30 8.6
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 8.6
AL138902-3|CAM12854.1| 556|Homo sapiens grainyhead-like 3 (Dros... 30 8.6
AL138902-2|CAI22857.2| 607|Homo sapiens grainyhead-like 3 (Dros... 30 8.6
AL138902-1|CAI22858.2| 626|Homo sapiens grainyhead-like 3 (Dros... 30 8.6
AL031431-3|CAM12855.1| 556|Homo sapiens grainyhead-like 3 (Dros... 30 8.6
AL031431-2|CAI21406.2| 607|Homo sapiens grainyhead-like 3 (Dros... 30 8.6
AL031431-1|CAI21407.2| 626|Homo sapiens grainyhead-like 3 (Dros... 30 8.6
AK074386-1|BAB85067.1| 626|Homo sapiens protein ( Homo sapiens ... 30 8.6
>BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for
MGC:134704) protein.
Length = 44
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 452 MIGRADIEGSKSNVAMNAWCHKPVIPVVTF 541
MIGRADIEGSKS+VAMNAW + P F
Sbjct: 1 MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30
Score = 37.5 bits (83), Expect = 0.056
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 511 PQASYPCGNFSGTSC*K 561
PQASYPCGNFS TSC K
Sbjct: 21 PQASYPCGNFSDTSCLK 37
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 229 TPLRPKPA*PNPARICSLWSPESRE 155
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>BC036890-1|AAH36890.1| 555|Homo sapiens GRHL3 protein protein.
Length = 555
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 585 GRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNFPPGSVLEPDP 764
G+A +P L+ S + + +L L S+ VPP + P S + DP
Sbjct: 96 GKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDP 155
Query: 765 REF*TATNVSATSP 806
+E ++ TSP
Sbjct: 156 QESMLFPDILKTSP 169
>AY231160-1|AAO67370.1| 607|Homo sapiens sister-of-mammalian
grainyhead isoform 1 protein.
Length = 607
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 585 GRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNFPPGSVLEPDP 764
G+A +P L+ S + + +L L S+ VPP + P S + DP
Sbjct: 148 GKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDP 207
Query: 765 REF*TATNVSATSP 806
+E ++ TSP
Sbjct: 208 QESMLFPDILKTSP 221
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 229 TPLRPKPA*PNPARICSLWSPESRE 155
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL138902-3|CAM12854.1| 556|Homo sapiens grainyhead-like 3
(Drosophila) protein.
Length = 556
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 585 GRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNFPPGSVLEPDP 764
G+A +P L+ S + + +L L S+ VPP + P S + DP
Sbjct: 97 GKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDP 156
Query: 765 REF*TATNVSATSP 806
+E ++ TSP
Sbjct: 157 QESMLFPDILKTSP 170
>AL138902-2|CAI22857.2| 607|Homo sapiens grainyhead-like 3
(Drosophila) protein.
Length = 607
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 585 GRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNFPPGSVLEPDP 764
G+A +P L+ S + + +L L S+ VPP + P S + DP
Sbjct: 148 GKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDP 207
Query: 765 REF*TATNVSATSP 806
+E ++ TSP
Sbjct: 208 QESMLFPDILKTSP 221
>AL138902-1|CAI22858.2| 626|Homo sapiens grainyhead-like 3
(Drosophila) protein.
Length = 626
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 585 GRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNFPPGSVLEPDP 764
G+A +P L+ S + + +L L S+ VPP + P S + DP
Sbjct: 143 GKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDP 202
Query: 765 REF*TATNVSATSP 806
+E ++ TSP
Sbjct: 203 QESMLFPDILKTSP 216
>AL031431-3|CAM12855.1| 556|Homo sapiens grainyhead-like 3
(Drosophila) protein.
Length = 556
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 585 GRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNFPPGSVLEPDP 764
G+A +P L+ S + + +L L S+ VPP + P S + DP
Sbjct: 97 GKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDP 156
Query: 765 REF*TATNVSATSP 806
+E ++ TSP
Sbjct: 157 QESMLFPDILKTSP 170
>AL031431-2|CAI21406.2| 607|Homo sapiens grainyhead-like 3
(Drosophila) protein.
Length = 607
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 585 GRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNFPPGSVLEPDP 764
G+A +P L+ S + + +L L S+ VPP + P S + DP
Sbjct: 148 GKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDP 207
Query: 765 REF*TATNVSATSP 806
+E ++ TSP
Sbjct: 208 QESMLFPDILKTSP 221
>AL031431-1|CAI21407.2| 626|Homo sapiens grainyhead-like 3
(Drosophila) protein.
Length = 626
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 585 GRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNFPPGSVLEPDP 764
G+A +P L+ S + + +L L S+ VPP + P S + DP
Sbjct: 143 GKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDP 202
Query: 765 REF*TATNVSATSP 806
+E ++ TSP
Sbjct: 203 QESMLFPDILKTSP 216
>AK074386-1|BAB85067.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ23806 fis, clone HRC03576. ).
Length = 626
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +3
Query: 585 GRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNFPPGSVLEPDP 764
G+A +P L+ S + + +L L S+ VPP + P S + DP
Sbjct: 143 GKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDP 202
Query: 765 REF*TATNVSATSP 806
+E ++ TSP
Sbjct: 203 QESMLFPDILKTSP 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,294,833
Number of Sequences: 237096
Number of extensions: 2760153
Number of successful extensions: 6753
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6709
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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