Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0382
         (483 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7JJE6 Cluster: Amino acid transporter; n=12; Francisel...    33   4.5  
UniRef50_Q7QUX8 Cluster: GLP_577_15796_29142; n=3; root|Rep: GLP...    33   4.5  
UniRef50_Q4YRP5 Cluster: Putative uncharacterized protein; n=5; ...    33   4.5  
UniRef50_Q85672 Cluster: ORF1; n=1; Diadromus pulchellus idnoreo...    32   7.8  

>UniRef50_A7JJE6 Cluster: Amino acid transporter; n=12; Francisella
           tularensis|Rep: Amino acid transporter - Francisella
           tularensis subsp. novicida GA99-3549
          Length = 449

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 327 NKYSDFTLKNLLPHKNGFHTLLLLVTIEFSL 235
           N  +DF+L N++PH N +H L  L  I F++
Sbjct: 181 NSATDFSLANMIPHDNIWHNLSTLTIIMFAM 211


>UniRef50_Q7QUX8 Cluster: GLP_577_15796_29142; n=3; root|Rep:
            GLP_577_15796_29142 - Giardia lamblia ATCC 50803
          Length = 4448

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 470  LFKTTQYHSFVHFLNKQITYFISHHTISLS 381
            LF+T  Y SFV +L  ++   I+H+T SLS
Sbjct: 1468 LFQTRHYESFVDYLRLELAEIITHYTNSLS 1497


>UniRef50_Q4YRP5 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium berghei
          Length = 285

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 333 SXNKYSDFTLKNLLPHKNGFHTLLLLVTIEFS 238
           S NKYSD T KNLL +   F+  +LL  +++S
Sbjct: 241 SDNKYSDITQKNLLNYAKIFNPYILLRKVDYS 272


>UniRef50_Q85672 Cluster: ORF1; n=1; Diadromus pulchellus
           idnoreovirus 1|Rep: ORF1 - Diadromus pulchellus
           idnoreovirus 1
          Length = 1072

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 64  FKGSKISIYREMAHKKKKFYVM*YLPNTSIKQYTYINPV 180
           F G++++I+RE       + VM Y+P+     Y Y+NP+
Sbjct: 442 FIGNELTIFRERLSNYSSWGVMHYIPSMPESIYVYMNPI 480


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,965,735
Number of Sequences: 1657284
Number of extensions: 8083327
Number of successful extensions: 14181
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14179
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)