BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVm0382 (483 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_04_0006 - 13632902-13633026,13634013-13634179,13634286-136344... 28 3.4 12_02_0661 + 21644328-21644517,21644697-21644875,21644899-216459... 27 7.9 >09_04_0006 - 13632902-13633026,13634013-13634179,13634286-13634437, 13634564-13634672,13635096-13635280,13635372-13635687, 13635796-13635903,13635994-13636139,13636223-13636237 Length = 440 Score = 28.3 bits (60), Expect = 3.4 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -1 Query: 144 VR*VLHDIKFFFLVCHLSVNGNFG 73 +R VLH+ F F+ CHL+ G G Sbjct: 200 IRFVLHETSFCFVCCHLASGGKQG 223 >12_02_0661 + 21644328-21644517,21644697-21644875,21644899-21645922, 21647108-21647262 Length = 515 Score = 27.1 bits (57), Expect = 7.9 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Frame = -2 Query: 317 LILH*KIYCLIKMVSTHCYC**LLNFH*NSNLKYLCDIQFHK-INTITGFIYVYCFMLVL 141 LI H +++ I V CY + + L+ + +I K +N+I + Y F L+ Sbjct: 369 LITHDEVFTKILPVEILCYIILDKHVEIHDMLEKVSEIASLKSLNSI--HVCKYTFNLIG 426 Query: 140 GKYYMT*NFFFLCAISL*MEILEPLKIPLLFNH 42 G Y N F++CAI + + L L++ L+ NH Sbjct: 427 G--YAE-NKFYMCAICITCDKLADLRLKLVNNH 456 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,761,054 Number of Sequences: 37544 Number of extensions: 185898 Number of successful extensions: 255 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 254 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 255 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 987904180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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