Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0382
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   3.1  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   3.1  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   3.1  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   3.1  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   7.3  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -2

Query: 473 HLFKTTQYHSFVHFLNKQITYFISHHTI 390
           ++  +T++ SFV+  ++++ + I HH I
Sbjct: 15  YIVLSTEWTSFVNPWSRELEFVIGHHRI 42


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -2

Query: 473 HLFKTTQYHSFVHFLNKQITYFISHHTI 390
           ++  +T++ SFV+  ++++ + I HH I
Sbjct: 15  YIVLSTEWTSFVNPWSRELEFVIGHHRI 42


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -2

Query: 473 HLFKTTQYHSFVHFLNKQITYFISHHTI 390
           ++  +T++ SFV+  ++++ + I HH I
Sbjct: 15  YIVLSTEWTSFVNPWSRELEFVIGHHRI 42


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -2

Query: 473 HLFKTTQYHSFVHFLNKQITYFISHHTI 390
           ++  +T++ SFV+  ++++ + I HH I
Sbjct: 15  YIVLSTEWTSFVNPWSRELEFVIGHHRI 42


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 59  PLLFNHLNNVKFMIYKIIR 3
           PLLF+H+ + K   YK+ R
Sbjct: 140 PLLFSHIASTKDAGYKLYR 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,397
Number of Sequences: 2352
Number of extensions: 9593
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)