Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0382
         (483 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023660-1|AAH23660.1|  410|Homo sapiens epithelial stromal inte...    29   6.5  
AL445217-1|CAM17275.1|  410|Homo sapiens epithelial stromal inte...    29   6.5  
AL137878-1|CAM13100.1|  410|Homo sapiens epithelial stromal inte...    29   6.5  

>BC023660-1|AAH23660.1|  410|Homo sapiens epithelial stromal
           interaction 1 (breast) protein.
          Length = 410

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -1

Query: 273 HTLLLLVTIEFSLKF*FEISM*HSISQN*YNNWIYICILFYACVR*VLHDIKFFFLVC 100
           H +L L  I FSL     IS  H++ +   ++W+ + +L YAC+  ++ ++  F L C
Sbjct: 347 HEMLFLNVILFSLTVFTLISTAHTLDRAVRSDWL-LLVLIYACLEELIPEL-IFNLYC 402


>AL445217-1|CAM17275.1|  410|Homo sapiens epithelial stromal
           interaction 1 (breast) protein.
          Length = 410

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -1

Query: 273 HTLLLLVTIEFSLKF*FEISM*HSISQN*YNNWIYICILFYACVR*VLHDIKFFFLVC 100
           H +L L  I FSL     IS  H++ +   ++W+ + +L YAC+  ++ ++  F L C
Sbjct: 347 HEMLFLNVILFSLTVFTLISTAHTLDRAVRSDWL-LLVLIYACLEELIPEL-IFNLYC 402


>AL137878-1|CAM13100.1|  410|Homo sapiens epithelial stromal
           interaction 1 (breast) protein.
          Length = 410

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -1

Query: 273 HTLLLLVTIEFSLKF*FEISM*HSISQN*YNNWIYICILFYACVR*VLHDIKFFFLVC 100
           H +L L  I FSL     IS  H++ +   ++W+ + +L YAC+  ++ ++  F L C
Sbjct: 347 HEMLFLNVILFSLTVFTLISTAHTLDRAVRSDWL-LLVLIYACLEELIPEL-IFNLYC 402


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,832,217
Number of Sequences: 237096
Number of extensions: 1250090
Number of successful extensions: 1318
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)