Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0382
         (483 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P...    29   4.4  
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P...    29   4.4  

>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-PB,
            isoform B protein.
          Length = 2968

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 358  LCFF*KAQESDIVWCEIKYVICLFKKCTNE*YCV 459
            LCF  K+ E +  W   +YV C F    N+  CV
Sbjct: 2606 LCFTCKSNECNDAWSTEEYVSCTFCNSANKSSCV 2639


>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-PA,
            isoform A protein.
          Length = 2931

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 358  LCFF*KAQESDIVWCEIKYVICLFKKCTNE*YCV 459
            LCF  K+ E +  W   +YV C F    N+  CV
Sbjct: 2569 LCFTCKSNECNDAWSTEEYVSCTFCNSANKSSCV 2602


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,528,229
Number of Sequences: 53049
Number of extensions: 365686
Number of successful extensions: 567
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)