Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0379
(639 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6NKM5 Cluster: LD48059p; n=1; Drosophila melanogaster|... 58 2e-07
UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;... 58 2e-07
UniRef50_A7RNM9 Cluster: Predicted protein; n=4; Eumetazoa|Rep: ... 56 5e-07
UniRef50_Q5C0F6 Cluster: Putative uncharacterized protein; n=1; ... 56 7e-07
UniRef50_UPI0000F2E2E1 Cluster: PREDICTED: similar to SH2-B homo... 55 2e-06
UniRef50_Q59KL1 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_A3LSK4 Cluster: Predicted protein; n=4; Ascomycota|Rep:... 50 5e-05
UniRef50_Q652R5 Cluster: Putative uncharacterized protein P0603C... 42 0.017
UniRef50_UPI0000F2EBE7 Cluster: PREDICTED: similar to COL5A2 pro... 40 0.051
UniRef50_A4M975 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_A3LSK3 Cluster: Predicted protein; n=7; Fungi/Metazoa g... 37 0.36
UniRef50_A5KL06 Cluster: Putative uncharacterized protein; n=10;... 35 1.9
UniRef50_Q5E0Z7 Cluster: TadG-like protein; n=1; Vibrio fischeri... 33 5.8
UniRef50_A0C4X9 Cluster: Chromosome undetermined scaffold_15, wh... 33 5.8
>UniRef50_Q6NKM5 Cluster: LD48059p; n=1; Drosophila
melanogaster|Rep: LD48059p - Drosophila melanogaster
(Fruit fly)
Length = 46
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -3
Query: 352 EHKCWDPKDGELCLVRSKSGETLMEDRSDSDVQ 254
EH C DPKDGEL L+R KSGETLMEDR+ SDVQ
Sbjct: 9 EHICCDPKDGELYLIRLKSGETLMEDRNSSDVQ 41
>UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 440
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = +1
Query: 256 ARQNRYGPPSGFPLTST*PGIVHHLSGPSICAQSAPSFTDWKRDASGVRKSRT 414
ARQ+RYGPP FPL S PGIVHHLSGP+ A+ AP RD VR RT
Sbjct: 123 ARQDRYGPPPEFPLASPCPGIVHHLSGPNAYAR-APPPRRGGRDGPVVRPRRT 174
>UniRef50_A7RNM9 Cluster: Predicted protein; n=4; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 53
Score = 56.4 bits (130), Expect = 5e-07
Identities = 26/43 (60%), Positives = 28/43 (65%)
Frame = +1
Query: 223 FRPYTQFRRSIARQNRYGPPSGFPLTST*PGIVHHLSGPSICA 351
F P +F ARQNRY PP FPL S GIVHHLSGP+ CA
Sbjct: 2 FAPIPKFDDRFARQNRYEPPPEFPLASPYSGIVHHLSGPNRCA 44
>UniRef50_Q5C0F6 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 102
Score = 56.0 bits (129), Expect = 7e-07
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -1
Query: 402 SHSRGVSFPISE*RRALSTNAGTRKMVNYAWSGRSQGKP*WRTVAILTC 256
+H R VS P + R + S TRKMVNYAW+GRSQ K WR+VA+LTC
Sbjct: 27 AHHRPVS-PAAPGRWSTSARVRTRKMVNYAWAGRSQRKLWWRSVAVLTC 74
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -3
Query: 256 QSIVGTGYRGERLIEPSSSWFRPKFPSG 173
+S+V GYRGERLIEPSSSWF PKFPSG
Sbjct: 75 KSVVRPGYRGERLIEPSSSWFPPKFPSG 102
>UniRef50_UPI0000F2E2E1 Cluster: PREDICTED: similar to SH2-B
homolog,; n=2; Mammalia|Rep: PREDICTED: similar to SH2-B
homolog, - Monodelphis domestica
Length = 394
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +1
Query: 256 ARQNRYGPPSGFPLTST*PGIVHHLSGPSICAQSAP 363
ARQ+RYGPP FPL S PGIVHHLSGP+ A + P
Sbjct: 60 ARQDRYGPPPEFPLASPCPGIVHHLSGPNTHAHAPP 95
>UniRef50_Q59KL1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 108
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +3
Query: 255 CTSESLRSSIRVSPDFDLTRHSSPSFGSQHLCS 353
CTSE LR+S RVS F L RHSSPSFGSQ LCS
Sbjct: 17 CTSEPLRASTRVSSGFTLFRHSSPSFGSQQLCS 49
Score = 34.3 bits (75), Expect = 2.5
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 208 MVRLVFRPYTQFRRSI 255
MVRLVFRPYTQ RRSI
Sbjct: 1 MVRLVFRPYTQIRRSI 16
>UniRef50_A3LSK4 Cluster: Predicted protein; n=4; Ascomycota|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 81
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = +1
Query: 223 FRPYTQFRRSIARQNRYGPPSGFPLTST*PGIVHHLSGPS 342
F P +F ARQNRY PP FP S GIVHHLSGP+
Sbjct: 2 FAPIPKFDDRFARQNRYEPPPEFPSASPYSGIVHHLSGPN 41
>UniRef50_Q652R5 Cluster: Putative uncharacterized protein
P0603C10.50; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0603C10.50 - Oryza sativa subsp. japonica (Rice)
Length = 248
Score = 41.5 bits (93), Expect = 0.017
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 229 PYTQFRRSIARQNRYGPPSGFPLTST*PGIVHHLSGPSI 345
P + + RQ R+ PP FPLTS I+HHLSGP +
Sbjct: 38 PIPKSDKRFVRQYRFEPPLDFPLTSPRSSIIHHLSGPDM 76
Score = 40.7 bits (91), Expect = 0.029
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3
Query: 171 YPEGNFGRNQLLDGSISLSPL 233
YPEGNFG NQLLDGSI L P+
Sbjct: 19 YPEGNFGGNQLLDGSIGLIPI 39
>UniRef50_UPI0000F2EBE7 Cluster: PREDICTED: similar to COL5A2
protein; n=9; Monodelphis domestica|Rep: PREDICTED:
similar to COL5A2 protein - Monodelphis domestica
Length = 774
Score = 39.9 bits (89), Expect = 0.051
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1
Query: 256 ARQNRYGPPSGFPLTST*PGIVH 324
ARQ+RYGPP FPL S PGIVH
Sbjct: 24 ARQDRYGPPPEFPLASPCPGIVH 46
>UniRef50_A4M975 Cluster: Putative uncharacterized protein; n=1;
Petrotoga mobilis SJ95|Rep: Putative uncharacterized
protein - Petrotoga mobilis SJ95
Length = 124
Score = 38.7 bits (86), Expect = 0.12
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 169 AILRETSDGTSY*MVRLVFRPYTQFRRSIARQNRYGPPSGFPLTST*PGIVHHLSG--PS 342
A+ S TSY VRL F Y R +++GPP GF S+ + H SG P
Sbjct: 24 AVPTHVSGRTSYPQVRLAFHSYPHVIRGFFTIHQFGPPLGFTQASSCTWVAHLASGLFPV 83
Query: 343 ICA 351
CA
Sbjct: 84 TCA 86
>UniRef50_A3LSK3 Cluster: Predicted protein; n=7; Fungi/Metazoa
group|Rep: Predicted protein - Pichia stipitis (Yeast)
Length = 94
Score = 37.1 bits (82), Expect = 0.36
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +3
Query: 57 GVLTHLKFENRLRSFRPQCL 116
G+LT+LKFENRLRSF+PQ L
Sbjct: 75 GLLTYLKFENRLRSFQPQDL 94
>UniRef50_A5KL06 Cluster: Putative uncharacterized protein; n=10;
Bacteria|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 245
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +1
Query: 196 TSY*MVRLVFRPYTQFRRSIARQNRYGPPSGFPLTST*PGIVHHLSG 336
TSY VRL F PY ++ +GPP F TST I H +SG
Sbjct: 13 TSYLRVRLEFLPYPHLIPTLFNGCGFGPPLPFTATSTWTWIDHPVSG 59
>UniRef50_Q5E0Z7 Cluster: TadG-like protein; n=1; Vibrio fischeri
ES114|Rep: TadG-like protein - Vibrio fischeri (strain
ATCC 700601 / ES114)
Length = 423
Score = 33.1 bits (72), Expect = 5.8
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = -3
Query: 271 SDSDVQSIVGTGYRGERLIEPSSSWFRPKFPSG*LASI*NFKTVSSGKAND*RHWGRNDL 92
SD+ +Q + G + +P + WFRP P+ +A+I N KT K+ + G +D+
Sbjct: 230 SDTGIQCSLSQGVNSKN--KPGN-WFRPVKPANTVANIWNEKTEDYCKSG--AYAGFHDV 284
Query: 91 NLFSNF 74
NL SNF
Sbjct: 285 NLTSNF 290
>UniRef50_A0C4X9 Cluster: Chromosome undetermined scaffold_15, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_15,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 350
Score = 33.1 bits (72), Expect = 5.8
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = -3
Query: 307 RSKSGETLMEDRSDSDVQSIV-----GTGYRGERLIEPSSSWFRPK 185
+ + GE ++E+ SD D+ +V G GYRGE L E + +PK
Sbjct: 212 QDEQGEKIIENLSDEDLGKVVRELLRGDGYRGEYLFEDDTKSTKPK 257
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,910,541
Number of Sequences: 1657284
Number of extensions: 12653735
Number of successful extensions: 25586
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 25020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25582
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -