Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0377
(720 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.82
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.82
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 25 0.82
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.9
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 23 1.9
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 3.3
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 22 4.4
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 22 4.4
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 4.4
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 5.8
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 22 5.8
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 22 5.8
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 22 5.8
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 21 7.6
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.82
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 453 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 322
LP DS L L V + S V LN++A++ T V + F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.82
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 453 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 322
LP DS L L V + S V LN++A++ T V + F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 24.6 bits (51), Expect = 0.82
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 264 GLQGHRPGLFPS*VQTYLRRK 326
G+ GH GL+PS V T +K
Sbjct: 215 GVTGHHSGLYPSAVDTTTNQK 235
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 453 LPADSRACLVLAVAVGRSAIVALNIIAQ 370
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 453 LPADSRACLVLAVAVGRSAIVALNIIAQ 370
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 453 LPADSRACLVLAVAVGRSAIVALNIIAQ 370
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 60 MLQIPTSLTTFWRSSFTIASSSPITTVRLKRA 155
+L IPT T +SSF+I+S P T + ++
Sbjct: 8 ILVIPTMARTPLKSSFSISSILPETALEAPKS 39
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = +1
Query: 292 FPVEFRLIFAENAIKLMYKRDGLALTLS 375
FP+++ L+F+E + L++K + + +S
Sbjct: 701 FPIDYSLVFSETKL-LLFKITSVMIAVS 727
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 331 IKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRV 444
IKL+ +++ LS+D ++ + G+ KDK P++
Sbjct: 211 IKLVVEKER-EKELSDDEAEEEKKEEEGEDKDKDKPKI 247
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 535 ALTGTATIWPSES 573
A+TGT T+ PS+S
Sbjct: 270 AMTGTKTVMPSQS 282
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 645 IYNREYSKALTLSRTVEPRVTAW 713
IY REYS T +T + +W
Sbjct: 213 IYQREYSPTFTQQQTQYSQYGSW 235
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.8 bits (44), Expect = 5.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 355 GLALTLSNDVQGDDGRPAYGDGKDKTSPRVS 447
G TLSN + PA G GK+ T + S
Sbjct: 335 GRTFTLSNTAKFGVHAPASGGGKEGTYTKES 365
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 226 DELHGVRLSTWLQGS 270
+ELH ++S WL+GS
Sbjct: 12 NELHIKQISKWLRGS 26
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 226 DELHGVRLSTWLQGS 270
+ELH ++S WL+GS
Sbjct: 12 NELHIKQISKWLRGS 26
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 226 DELHGVRLSTWLQGS 270
+ELH ++S WL+GS
Sbjct: 12 NELHIKQISKWLRGS 26
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 48 WHLCMLQIPTSLTTFWRSS 104
+H+ M +PT L +F++S+
Sbjct: 59 YHIFMHIVPTKLISFYKST 77
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,824
Number of Sequences: 336
Number of extensions: 2658
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -