SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0377
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   1.4  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.1  
AY825780-1|AAV70343.1|  147|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825779-1|AAV70342.1|  147|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825778-1|AAV70341.1|  161|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825777-1|AAV70340.1|  161|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825775-1|AAV70338.1|  161|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825774-1|AAV70337.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825773-1|AAV70336.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825768-1|AAV70331.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825767-1|AAV70330.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825765-1|AAV70328.1|  147|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825764-1|AAV70327.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825763-1|AAV70326.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825762-1|AAV70325.1|  146|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825761-1|AAV70324.1|  146|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825760-1|AAV70323.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825759-1|AAV70322.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825758-1|AAV70321.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825757-1|AAV70320.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825755-1|AAV70318.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825754-1|AAV70317.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825750-1|AAV70313.1|  130|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825747-1|AAV70310.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825746-1|AAV70309.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825745-1|AAV70308.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825744-1|AAV70307.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825743-1|AAV70306.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825741-1|AAV70304.1|  160|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825736-1|AAV70299.1|  161|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY825735-1|AAV70298.1|  161|Anopheles gambiae alanyl-tRNA synthe...    24   5.4  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   5.4  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   7.2  
AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotens...    23   9.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   9.5  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
 Frame = +2

Query: 125 ADYDSAVEKSKHLYEEKKS-----EVITNVVNKLIRNNKMNCMEYAYQLGSRAPRTSSGI 289
           AD+        H+Y E+K      ++  N + K  R+N +  M+Y  +   RA +     
Sbjct: 677 ADFCDVWINIAHIYVEQKQYISAIQMYENCLKKFYRHNNVEVMQYLARAYFRAGKLKEAK 736

Query: 290 VSQLSSDLSSPKTRLSLCTSATV 358
           ++ L +   +P+  + L   A V
Sbjct: 737 MTLLKARRVAPQDTVLLFNIALV 759


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 379 DVQGDDGRPAYGDGKDKTSPRV 444
           D  GD GRPAY    D +  +V
Sbjct: 101 DRNGDGGRPAYSGNSDPSMDQV 122


>AY825780-1|AAV70343.1|  147|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 147

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 97  VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 135


>AY825779-1|AAV70342.1|  147|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 147

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 97  VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 135


>AY825778-1|AAV70341.1|  161|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 161

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825777-1|AAV70340.1|  161|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 161

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825775-1|AAV70338.1|  161|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 161

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825774-1|AAV70337.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825773-1|AAV70336.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825768-1|AAV70331.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825767-1|AAV70330.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825765-1|AAV70328.1|  147|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 147

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 98  VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 136


>AY825764-1|AAV70327.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825763-1|AAV70326.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825762-1|AAV70325.1|  146|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 146

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 97  VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 135


>AY825761-1|AAV70324.1|  146|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 146

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 97  VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 135


>AY825760-1|AAV70323.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825759-1|AAV70322.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825758-1|AAV70321.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825757-1|AAV70320.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825755-1|AAV70318.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825754-1|AAV70317.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825750-1|AAV70313.1|  130|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 130

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 81  VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 119


>AY825747-1|AAV70310.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825746-1|AAV70309.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825745-1|AAV70308.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825744-1|AAV70307.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825743-1|AAV70306.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825741-1|AAV70304.1|  160|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825736-1|AAV70299.1|  161|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 161

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY825735-1|AAV70298.1|  161|Anopheles gambiae alanyl-tRNA
           synthetase protein.
          Length = 161

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 396 IVALNIIAQRQSETVALVHKLNRVFGEDKSELNWETIPD 280
           +V   +  +  S T AL H L +V G+D  +     +P+
Sbjct: 111 VVRRQLTMKNHSATHALNHSLLKVLGQDTDQRGSLVVPE 149


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 457 IALWENNKVYFKILNTELTNTWYWESALTGT 549
           +A W + KV  KI  T   ++W+ E+ +  T
Sbjct: 275 LAKWRDEKVAVKIFFTTEESSWFRETEIYQT 305


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 453 LPADSRACLVLAVAVGRSAIVALNIIAQ 370
           LP DS   L L V +  S  V LN++A+
Sbjct: 255 LPPDSGEKLTLGVTILLSLTVFLNLVAE 282


>AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotensin
           converting enzymeprecursor protein.
          Length = 339

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 261 PGLQGHRPGLFPS 299
           PGL+G RP  FP+
Sbjct: 35  PGLEGRRPVTFPN 47


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 526 WESALTGTATIWPS 567
           W S  TGTA IW S
Sbjct: 45  WVSDSTGTAAIWAS 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,103
Number of Sequences: 2352
Number of extensions: 11562
Number of successful extensions: 79
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -