Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0377
         (720 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC074331-4|AAF88107.1|  751|Homo sapiens Hypothetical zinc finge...    34   0.45 
AY363099-1|AAQ24172.1|  837|Homo sapiens normal early placenta p...    32   2.4  
AB033114-1|BAA86602.1| 1245|Homo sapiens KIAA1288 protein protein.     32   2.4  
AB209155-1|BAD92392.1|  699|Homo sapiens serine/threonine kinase...    30   9.6  

>AC074331-4|AAF88107.1|  751|Homo sapiens Hypothetical zinc
           finger-like protein protein.
          Length = 751

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +2

Query: 86  DILEEQLYNSVVVADYDSAVEK-SKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLGS 262
           D+ + +LY  V+V ++ + V   SKH   + K E +     K + N +++C +   Q+ S
Sbjct: 21  DLTQRKLYRDVMVENFKNLVAVGSKH---QNKMETLQKFALKYLSNQELSCWQIWKQVAS 77

Query: 263 RAPRTSSGIVSQL 301
              R   G  SQL
Sbjct: 78  ELTRCLQGKSSQL 90


>AY363099-1|AAQ24172.1|  837|Homo sapiens normal early placenta
           protein.
          Length = 837

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +2

Query: 161 LYEEKKSEVITNVV-----NKLIRNNKMNCMEYAYQLGSRAPRTSSGIVSQLSSDLSSPK 325
           L  +KK+E++ N       NKLI +  ++   ++     R PRT+S + S    D+    
Sbjct: 561 LNADKKAEILINKTRKQQFNKLITSQAVHVTTHSKNASHRVPRTTSAVKSN-QEDVDKAS 619

Query: 326 TRLSLCTSATVS 361
           +  S C + +VS
Sbjct: 620 SSNSACETGSVS 631


>AB033114-1|BAA86602.1| 1245|Homo sapiens KIAA1288 protein protein.
          Length = 1245

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +2

Query: 161 LYEEKKSEVITNVV-----NKLIRNNKMNCMEYAYQLGSRAPRTSSGIVSQLSSDLSSPK 325
           L  +KK+E++ N       NKLI +  ++   ++     R PRT+S + S    D+    
Sbjct: 536 LNADKKAEILINKTHKQQFNKLITSQAVHVTTHSKNASHRVPRTTSAVKSN-QEDVDKAS 594

Query: 326 TRLSLCTSATVS 361
           +  S C + +VS
Sbjct: 595 SSNSACETGSVS 606


>AB209155-1|BAD92392.1|  699|Homo sapiens serine/threonine kinase 23
           variant protein.
          Length = 699

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 254 LGSRAPRTSSGIVSQLSSDLSSPKTRLSLCTSAT 355
           LG+RAP + +G  S L+S  +SP+    LC+ A+
Sbjct: 123 LGARAPGSVAGAGSGLASSQASPQQACCLCSQAS 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,232,960
Number of Sequences: 237096
Number of extensions: 1740251
Number of successful extensions: 4854
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4854
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)