Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0374
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           30   0.070
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   8.0  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.0  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 30.3 bits (65), Expect = 0.070
 Identities = 16/66 (24%), Positives = 34/66 (51%)
 Frame = -2

Query: 525  SSKVSVSYNGCPTLQFETHYLFTAEIGRVVVPTRADLQEVLPPVYIYLYTCIYVSRDDTI 346
            ++++S SYN   ++  +     T   G   +  R +++++LP   + + TC +V     I
Sbjct: 983  ANEISCSYNNATSILRDNGTKCTFREGMSSIVHRQEIEDMLP--LLLVATCAFVGFFGLI 1040

Query: 345  FGLFIF 328
            FG+F +
Sbjct: 1041 FGIFCY 1046


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 480  FETHYLFTAEIGRVVVPTRADLQEVLP 400
            F  H  F AEIG  +V    D  E+LP
Sbjct: 936  FHCHIEFHAEIGMSLVLKVGDSSEMLP 962


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 87  CKSILRDIIGDRLICISY 34
           C+   R I GDR++C +Y
Sbjct: 62  CQIAYRRIEGDRIVCAAY 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,314
Number of Sequences: 2352
Number of extensions: 15775
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)