Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0373
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    27   0.16 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   6.0  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 346 WEKKMTWKLRLILQTQMMKYSSC*FNSFKFYRVGSFALSTVITTPSADR 200
           W+K   W   ++L T  +  +S    SFKF  +G       ITT + DR
Sbjct: 39  WQKIQAWTYLILLTTWTVISASTRIKSFKFLTIG-----VGITTDTIDR 82


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 22/71 (30%), Positives = 36/71 (50%)
 Frame = +1

Query: 361 LSVFFSQVLNSSCLLETKSFSILLKNKFSLIHVLLINSTSAVSKLYGKVIYIDLCFL*SC 540
           ++VFF  ++  S    T+   ILLK   S++ +++I+       LYG +IY+ L  + S 
Sbjct: 102 VNVFFWVIILMSNYAFTRI--ILLK---SVLEIVIIDIEIYSQFLYGFMIYLILDTIKSK 156

Query: 541 LSNFQLLL*NY 573
                 LL NY
Sbjct: 157 YRQMHRLLANY 167


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 291 FII*VCNINLSFHVIFFSQKIMFVICI 371
           FII +C     +  I F+  ++F++CI
Sbjct: 107 FIILLCVYYFYYAFIIFTVHLLFLLCI 133



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 291 FII*VCNINLSFHVIFFSQKIMFVICI 371
           FII   ++      IFF+  ++F++C+
Sbjct: 173 FIIFTMHLLFCCAFIFFNMHLLFLLCL 199


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 288 YFII*VCNINLSFHVIFFS 344
           Y+ + VC +NLS   IFF+
Sbjct: 55  YYWLNVCCLNLSIVTIFFN 73


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 191 FFSKFK-ELIDRDI*YPRGSTKLQFVRLL 108
           FFS++  + ID D  YP  + K  FV+LL
Sbjct: 132 FFSQWGYDGIDIDWEYPANADKENFVKLL 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,309
Number of Sequences: 336
Number of extensions: 3242
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)