Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0373
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein. 31 3.3
U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein. 31 3.3
AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter r... 31 3.3
AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter r... 31 3.3
BC022363-1|AAH22363.1| 174|Homo sapiens VPS37A protein protein. 31 5.8
AY033079-1|AAK54349.1| 397|Homo sapiens hepatocellular carcinom... 31 5.8
AK057204-1|BAB71381.1| 397|Homo sapiens protein ( Homo sapiens ... 31 5.8
AF547097-1|AAQ12067.1| 372|Homo sapiens hcrp1 beta protein. 31 5.8
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 30 7.6
>X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein.
Length = 2349
Score = 31.5 bits (68), Expect = 3.3
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = -3
Query: 694 PNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINL 515
P++EE + KLL + +V + + L E+ L A S+ +NLI + KE++N
Sbjct: 1349 PDTEEYR---KLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNK 1405
Query: 514 CK*PCHTI*IQQKLSLLKVHVLERTYFLIKLKKI 413
+ T IQ+ L + + E+ + ++KKI
Sbjct: 1406 VRTEKET--IQKDLDAKIIDIQEKVKTITQVKKI 1437
>U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein.
Length = 2363
Score = 31.5 bits (68), Expect = 3.3
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = -3
Query: 694 PNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINL 515
P++EE + KLL + +V + + L E+ L A S+ +NLI + KE++N
Sbjct: 1349 PDTEEYR---KLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNK 1405
Query: 514 CK*PCHTI*IQQKLSLLKVHVLERTYFLIKLKKI 413
+ T IQ+ L + + E+ + ++KKI
Sbjct: 1406 VRTEKET--IQKDLDAKIIDIQEKVKTITQVKKI 1437
>AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter region
(to activated MET oncogene) protein.
Length = 2363
Score = 31.5 bits (68), Expect = 3.3
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = -3
Query: 694 PNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINL 515
P++EE + KLL + +V + + L E+ L A S+ +NLI + KE++N
Sbjct: 1349 PDTEEYR---KLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNK 1405
Query: 514 CK*PCHTI*IQQKLSLLKVHVLERTYFLIKLKKI 413
+ T IQ+ L + + E+ + ++KKI
Sbjct: 1406 VRTEKET--IQKDLDAKIIDIQEKVKTITQVKKI 1437
>AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter region
(to activated MET oncogene) protein.
Length = 2363
Score = 31.5 bits (68), Expect = 3.3
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = -3
Query: 694 PNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINL 515
P++EE + KLL + +V + + L E+ L A S+ +NLI + KE++N
Sbjct: 1349 PDTEEYR---KLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNK 1405
Query: 514 CK*PCHTI*IQQKLSLLKVHVLERTYFLIKLKKI 413
+ T IQ+ L + + E+ + ++KKI
Sbjct: 1406 VRTEKET--IQKDLDAKIIDIQEKVKTITQVKKI 1437
>BC022363-1|AAH22363.1| 174|Homo sapiens VPS37A protein protein.
Length = 174
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = -3
Query: 730 REENYEKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNF----- 566
R+ +K E+L+ + + + +L SC+ S L A + + SDN
Sbjct: 71 RQTVLDKYELLTQMKSTFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFL 130
Query: 565 --KVEVENLISNFKENINLC 512
K+E+++ +S+F E +C
Sbjct: 131 EGKMEIDDFLSSFMEKRTIC 150
>AY033079-1|AAK54349.1| 397|Homo sapiens hepatocellular carcinoma
related protein 1 protein.
Length = 397
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = -3
Query: 730 REENYEKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNF----- 566
R+ +K E+L+ + + + +L SC+ S L A + + SDN
Sbjct: 294 RQTVLDKYELLTQMKSTFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFL 353
Query: 565 --KVEVENLISNFKENINLC 512
K+E+++ +S+F E +C
Sbjct: 354 EGKMEIDDFLSSFMEKRTIC 373
>AK057204-1|BAB71381.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ32642 fis, clone SYNOV2001144. ).
Length = 397
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = -3
Query: 730 REENYEKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNF----- 566
R+ +K E+L+ + + + +L SC+ S L A + + SDN
Sbjct: 294 RQTVLDKYELLTQMKSTFERKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFL 353
Query: 565 --KVEVENLISNFKENINLC 512
K+E+++ +S+F E +C
Sbjct: 354 EGKMEIDDFLSSFMEKRTIC 373
>AF547097-1|AAQ12067.1| 372|Homo sapiens hcrp1 beta protein.
Length = 372
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = -3
Query: 730 REENYEKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNF----- 566
R+ +K E+L+ + + + +L SC+ S L A + + SDN
Sbjct: 269 RQTVLDKYELLTQMKSTFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFL 328
Query: 565 --KVEVENLISNFKENINLC 512
K+E+++ +S+F E +C
Sbjct: 329 EGKMEIDDFLSSFMEKRTIC 348
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 30.3 bits (65), Expect = 7.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 264 LSFIGLVVLRYLP*SPHLAPTDFYFF 187
L+ +G VL + P SP L+PTD++FF
Sbjct: 261 LNELGYEVLPHPPYSPDLSPTDYHFF 286
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,326,327
Number of Sequences: 237096
Number of extensions: 1591858
Number of successful extensions: 9820
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9820
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -