Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0373
(744 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 26 0.32
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 23 3.0
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 23 3.0
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 3.0
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 23 3.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 4.0
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 7.0
AB264332-1|BAF44087.1| 58|Apis mellifera ecdysone-induced prot... 22 7.0
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 7.0
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 9.2
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 9.2
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 26.2 bits (55), Expect = 0.32
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 255 IGLVVLRYLP*SPHLAPTDFYFF 187
+G VL + P SP LAP+D++ F
Sbjct: 262 LGWDVLPHPPYSPDLAPSDYFLF 284
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 1 INIFYFYRSKYVSMASMHLC 60
I +FYF + K S A LC
Sbjct: 11 ILLFYFRKGKNASQAHKKLC 30
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 356 VCYLYFFHKYLTLPVC 403
VC+L FF Y+ +P C
Sbjct: 338 VCWLPFFLMYVIVPFC 353
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 356 VCYLYFFHKYLTLPVC 403
VC+L FF Y+ +P C
Sbjct: 338 VCWLPFFLMYVIVPFC 353
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -1
Query: 291 NIQVVDLILLSFIGLVVLRYLP*SPHLAPTDFYFF 187
++ + ++ ++F+GL LP P+ DF+ F
Sbjct: 247 SLGITTVLTMTFLGLEARTDLPKVPYPTALDFFVF 281
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 356 VCYLYFFHKYLTLPVC 403
VC+L FF Y+ +P C
Sbjct: 338 VCWLPFFLMYVIVPFC 353
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -2
Query: 389 LSTCEKNTDNKHYLLGKENDMETEIDIANSND 294
L TC++N++N G N + + N+N+
Sbjct: 216 LETCQRNSNNSTITAGNANTNASNNNNNNNNN 247
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 374 KNTDNKHYLLGKENDMETEIDIANSNDE 291
+N +N + +GK+N I+ + NDE
Sbjct: 36 QNNNNDDWSVGKKNSNSGTINESEFNDE 63
>AB264332-1|BAF44087.1| 58|Apis mellifera ecdysone-induced protein
75 protein.
Length = 58
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 733 SREENYEKAEILSPNSEEMKTE 668
S EE +ILSP+SE + +
Sbjct: 12 SAEEQQPSGDILSPSSEPLDND 33
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 733 SREENYEKAEILSPNSEEMKTE 668
S EE +ILSP+SE + +
Sbjct: 12 SAEEQQPSGDILSPSSEPLDND 33
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.4 bits (43), Expect = 9.2
Identities = 5/19 (26%), Positives = 13/19 (68%)
Frame = -2
Query: 86 GIKILPSCSQRCIDAMDTY 30
G+ ++P+C+ + + +D Y
Sbjct: 308 GVTMIPACTCKAVACLDPY 326
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 306 CNINLSFHVIFFSQKIMFVICI 371
C I L+FH I +FV+ +
Sbjct: 339 CGITLTFHEILKRANTLFVLTL 360
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,397
Number of Sequences: 438
Number of extensions: 3414
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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