Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0370
(734 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;... 142 8e-33
UniRef50_A4VF70 Cluster: Putative uncharacterized protein; n=1; ... 105 1e-21
UniRef50_UPI00006A2901 Cluster: UPI00006A2901 related cluster; n... 79 1e-13
UniRef50_A5K5F4 Cluster: Senescence-associated protein, putative... 75 2e-12
UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3; ... 71 2e-11
UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;... 70 7e-11
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0... 68 3e-10
UniRef50_A5B940 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_Q3E811 Cluster: Uncharacterized protein YLR162W-A; n=47... 59 1e-07
UniRef50_Q14C49 Cluster: 4933429F08Rik protein; n=3; Euarchontog... 47 6e-04
UniRef50_UPI0000D57947 Cluster: PREDICTED: hypothetical protein;... 44 0.005
UniRef50_A5LFT8 Cluster: Putative uncharacterized protein; n=2; ... 43 0.009
UniRef50_Q4YZY1 Cluster: Putative uncharacterized protein; n=4; ... 38 0.19
UniRef50_O74086 Cluster: Putative uncharacterized protein PHS003... 36 0.78
UniRef50_Q6L6Z3 Cluster: RRNA intron-encoded endonuclease; n=7; ... 36 0.78
UniRef50_A5K3Q3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A2FP94 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q3BKH8 Cluster: Putative uncharacterized protein; n=4; ... 34 4.2
UniRef50_Q0BY95 Cluster: RNA methyltransferase, TrmH family; n=1... 34 4.2
UniRef50_A4DID9 Cluster: Putative uncharacterized protein; n=10;... 34 4.2
UniRef50_UPI0000F2BA55 Cluster: PREDICTED: hypothetical protein;... 33 5.5
UniRef50_Q7QQ50 Cluster: GLP_139_12114_8350; n=1; Giardia lambli... 33 5.5
UniRef50_Q4SN05 Cluster: Chromosome 6 SCAF14544, whole genome sh... 33 7.3
UniRef50_O64896 Cluster: Trehalose-6-phosphate phosphatase; n=15... 33 7.3
UniRef50_UPI000155501D Cluster: PREDICTED: similar to TERF1 (TRF... 33 9.6
UniRef50_Q54MI9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
>UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;
n=4; Eukaryota|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 282
Score = 142 bits (344), Expect = 8e-33
Identities = 75/110 (68%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Frame = -3
Query: 639 HQ*GKTNLSHDGLIPAHVPF*WVNNPTLGEFVRND-RKSRHRRIKSNVAMNAWLPQASYP 463
HQ GKTNLSHDGLIPAHVP+ WVNNPTLGEF ++ KSNVAMNAWLPQASYP
Sbjct: 57 HQWGKTNLSHDGLIPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQASYP 116
Query: 462 CGNFSGTSC*KLFILKDR*AVLSQSLCVLNIWIKPAFALLLHARFLSSLS 313
CGNFS TS K LKDR A LS+ + VL I IK AF LL H RFL SLS
Sbjct: 117 CGNFSDTSSFKFRSLKDRLATLSRFVFVLEIRIKRAFTLLFHTRFLFSLS 166
Score = 39.1 bits (87), Expect = 0.11
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2
Query: 310 ALGHLRYSLTDVPPQSNSP 254
+LGHLRY LTDVPPQ NSP
Sbjct: 168 SLGHLRYLLTDVPPQPNSP 186
>UniRef50_A4VF70 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 116
Score = 105 bits (252), Expect = 1e-21
Identities = 62/114 (54%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Frame = +2
Query: 251 QGGV*LGRYICQRITQVS*GQLSEDRNLAWSKRAKAGLIQMFSTHRDCESTAYRSFSIKS 430
+GGV LGR CQ ITQ S QLSE+ NL +KR KA LI +FS + + ES AYRSF+ S
Sbjct: 3 RGGVCLGRNACQTITQASQVQLSENGNLTQNKRVKATLILIFSRNTNRESVAYRSFNFTS 62
Query: 431 F*QEVPEKLPQG*LACGSQAFIAT-XXXXXXXXXXXXXXTNSPSVGLFTHQKGT 589
F EV EKLPQG LACGSQ FI+T NS VGLFT Q+GT
Sbjct: 63 FKLEVSEKLPQGQLACGSQEFISTLLFDPSMSALPIIVKQNSQRVGLFTRQQGT 116
>UniRef50_UPI00006A2901 Cluster: UPI00006A2901 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A2901 UniRef100 entry -
Xenopus tropicalis
Length = 154
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = -2
Query: 424 YTKGSIGRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSP 254
Y GSIG AF V +RTE+ +Q SF PF E+SVL EL LGHLRY LTDVPPQ NSP
Sbjct: 25 YPCGSIGHAFTVCIRTENQNQMSFYPFVLHEISVLVELILGHLRYLLTDVPPQPNSP 81
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3
Query: 510 KSNVAMNAWLPQASYPCGN 454
KSNVAMNAWLPQASYPCG+
Sbjct: 11 KSNVAMNAWLPQASYPCGS 29
>UniRef50_A5K5F4 Cluster: Senescence-associated protein, putative;
n=1; Plasmodium vivax|Rep: Senescence-associated
protein, putative - Plasmodium vivax
Length = 131
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = -2
Query: 418 KGSIGRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSP 254
KGSIG AF +E +Q SF PF+ +E+SVL+EL GHLRY LTDVPPQSNSP
Sbjct: 49 KGSIGHAFTFSTFSESRNQTSFSPFSLQEISVLSELVFGHLRYYLTDVPPQSNSP 103
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3
Query: 510 KSNVAMNAWLPQASYPCGNFSGTS 439
KS VA +AW PQASYPCGNFS TS
Sbjct: 11 KSYVARSAWQPQASYPCGNFSDTS 34
>UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3;
Dikarya|Rep: Putative uncharacterized protein - Ustilago
maydis (Smut fungus)
Length = 160
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/56 (60%), Positives = 39/56 (69%)
Frame = -2
Query: 421 TKGSIGRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSP 254
+KGSIG F V + TE+ +Q F PF E+SVL E LGHLRY LTDVPPQ NSP
Sbjct: 26 SKGSIGHTFMVCIHTENQNQGDFYPFVLLEISVLHESPLGHLRYRLTDVPPQPNSP 81
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 495 MNAWLPQASYPCGNFSGTS 439
MNAWLPQASYPCGNFSGTS
Sbjct: 1 MNAWLPQASYPCGNFSGTS 19
>UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;
n=3; Eukaryota|Rep: Putative senescence-associated
protein - Plasmodium yoelii yoelii
Length = 205
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/57 (59%), Positives = 39/57 (68%)
Frame = -2
Query: 424 YTKGSIGRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSP 254
Y GSIG AF +E +Q SF PF+ +E+SVL EL GHL Y LTDVPPQSNSP
Sbjct: 25 YPCGSIGHAFTFSTFSESRNQTSFSPFSLQEISVLFELVFGHLCYFLTDVPPQSNSP 81
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -3
Query: 516 RIKSNVAMNAWLPQASYPCGN 454
R KS VA NAW PQASYPCG+
Sbjct: 9 RSKSYVAKNAWQPQASYPCGS 29
>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
LRRG00134 - Rattus norvegicus (Rat)
Length = 221
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/50 (66%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -3
Query: 576 WVNNPTLGEFVRND-RKSRHRRIKSNVAMNAWLPQASYPCGNFSGTSC*K 430
WVNNPTLGEF ++ KS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 25 WVNNPTLGEFCFTMIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 74
>UniRef50_A5B940 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 108
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = -2
Query: 418 KGSIGRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSP 254
KGSIG AF V +RT + +Q SF F E+ VL +L LGHLRY LTDV PQ NSP
Sbjct: 25 KGSIGYAFNVRIRTGNQNQTSFYHFVLHEIFVLVKLILGHLRYLLTDVSPQPNSP 79
>UniRef50_Q3E811 Cluster: Uncharacterized protein YLR162W-A; n=47;
Eukaryota|Rep: Uncharacterized protein YLR162W-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 62
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = -2
Query: 391 VPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSP 254
V + TE+ +Q F PF E+SVL E LGHLRY LTDVPPQ NSP
Sbjct: 2 VCIHTENQNQGDFYPFVLLEISVLHESPLGHLRYRLTDVPPQPNSP 47
>UniRef50_Q14C49 Cluster: 4933429F08Rik protein; n=3;
Euarchontoglires|Rep: 4933429F08Rik protein - Mus
musculus (Mouse)
Length = 29
Score = 46.8 bits (106), Expect = 6e-04
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -3
Query: 495 MNAWLPQASYPCGNFSGTSC*K 430
MNAW PQASYPCGNFS TSC K
Sbjct: 1 MNAWPPQASYPCGNFSDTSCLK 22
>UniRef50_UPI0000D57947 Cluster: PREDICTED: hypothetical protein;
n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
protein - Tribolium castaneum
Length = 70
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 57 SPTYATPLMSPYNARLESS 1
SPTYATPLMSPYNARLESS
Sbjct: 13 SPTYATPLMSPYNARLESS 31
>UniRef50_A5LFT8 Cluster: Putative uncharacterized protein; n=2;
Streptococcus pneumoniae|Rep: Putative uncharacterized
protein - Streptococcus pneumoniae SP3-BS71
Length = 44
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/39 (58%), Positives = 25/39 (64%)
Frame = +1
Query: 262 LTGAVHLSKNNAGVLRPAQRGQKPRVEQKGKSWLDPDVQ 378
+ GA HL +NA VLR A QK VEQKGKS LD D Q
Sbjct: 1 MAGAAHLLNDNADVLRGAHGEQKSPVEQKGKSPLDFDFQ 39
>UniRef50_Q4YZY1 Cluster: Putative uncharacterized protein; n=4;
Eukaryota|Rep: Putative uncharacterized protein -
Plasmodium berghei
Length = 54
Score = 38.3 bits (85), Expect = 0.19
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 564 DCSPIKRERELGLDRRET 617
DCSP RERELGLDRRET
Sbjct: 6 DCSPANRERELGLDRRET 23
>UniRef50_O74086 Cluster: Putative uncharacterized protein PHS003;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PHS003 - Pyrococcus horikoshii
Length = 52
Score = 36.3 bits (80), Expect = 0.78
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = +1
Query: 256 GSLTGAVHLSKNNAGVLRPAQRGQKPRVEQKGKS 357
GSL GA K G LR AQ GQ+ VE KGKS
Sbjct: 2 GSLAGAARPRKGIGGALRSAQAGQESAVECKGKS 35
>UniRef50_Q6L6Z3 Cluster: RRNA intron-encoded endonuclease; n=7;
Archaea|Rep: RRNA intron-encoded endonuclease -
Thermoproteus sp. IC-062
Length = 272
Score = 36.3 bits (80), Expect = 0.78
Identities = 28/64 (43%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 448 RKVTTGITGLWQPSVHSDVA--FDPSMSALPIIANKFAKRWIVHPSKGNVSWD*TVVRQV 621
RKVT GITG + V D A + +S+ P A AK + P KGNV W TV RQV
Sbjct: 204 RKVTPGITGSSRVRVPIDPAVWYPDVVSSHPGGAAA-AKGGVARPLKGNVRWVQTVARQV 262
Query: 622 SFTL 633
L
Sbjct: 263 GLYL 266
>UniRef50_A5K3Q3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1669
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 730 HHGRSAECMKPNVRNCGSSRTEQYYYRNDK 641
H G+ A+ + + R CG SRT +YY D+
Sbjct: 808 HEGKGADLAREDYRECGGSRTSEYYEEGDE 837
>UniRef50_A2FP94 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 474
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = -2
Query: 361 ASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPLAVSSNRITREF*TATSVSATSPL 182
A+FC F P +V+ L E L ++ L + PQ+ A+ SN I E TA + PL
Sbjct: 299 ANFCHFHPIQVNTLLEAGLINILLQLIENSPQAGGAFAIFSNLI--ESVTAQVIEVCKPL 356
>UniRef50_Q3BKH8 Cluster: Putative uncharacterized protein; n=4;
Bacteria|Rep: Putative uncharacterized protein -
Magnetospirillum gryphiswaldense
Length = 76
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 555 QALDCSPIKRERELGLDRRET 617
Q CSPIK RELGL+RRET
Sbjct: 17 QGFGCSPIKVVRELGLERRET 37
>UniRef50_Q0BY95 Cluster: RNA methyltransferase, TrmH family; n=1;
Hyphomonas neptunium ATCC 15444|Rep: RNA
methyltransferase, TrmH family - Hyphomonas neptunium
(strain ATCC 15444)
Length = 271
Score = 33.9 bits (74), Expect = 4.2
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 430 FLARGARKVTTGITGLWQPS---VHSDVAFDPSMSALPIIANKFAKRWIVHPSK 582
FLA GAR V+ G+ WQP + +D+A P +S L A K R ++ P +
Sbjct: 34 FLAEGARIVSEGLARGWQPETVIIAADMAERPQISDLARAAAKAGARVVMAPER 87
>UniRef50_A4DID9 Cluster: Putative uncharacterized protein; n=10;
Firmicutes|Rep: Putative uncharacterized protein -
Listeria monocytogenes FSL N3-165
Length = 112
Score = 33.9 bits (74), Expect = 4.2
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 451 KVTTGITGLWQPSVHSD-VAFDPSMSALPIIANKFAKRWIVHPSKGNVSWD*TVVRQ 618
K T GITGL P VH D + + + A K W V P K + SW VVRQ
Sbjct: 45 KATPGITGLSPPRVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRHASWVQNVVRQ 101
>UniRef50_UPI0000F2BA55 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 207
Score = 33.5 bits (73), Expect = 5.5
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = -3
Query: 273 RPSQTPPWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTA 133
R S PP PR G KRRR P RH AR +N+V P TA
Sbjct: 16 RGSLPPPTVPPRAGGGAGEKRRRG-PSRHSLAREGKNSVGGPADGTA 61
>UniRef50_Q7QQ50 Cluster: GLP_139_12114_8350; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12114_8350 - Giardia lamblia
ATCC 50803
Length = 1254
Score = 33.5 bits (73), Expect = 5.5
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 9/125 (7%)
Frame = -2
Query: 379 TEHLDQASFCPFAPREVSV-LAELALGHLRYSLTDVPPQSNSPLAVSSNRITREF*---- 215
T +D++ C P + + + ELA+ + L P+ S+ R F
Sbjct: 213 TRQIDESRACYGRPIKYDLEIQELAIQVMESELLTTFSYLQKPIVAHSSSERRHFFIPGN 272
Query: 214 TATSVSATSPLC--TLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETI-SHLC 44
T S + P+ LGT APAD + R LP R++ ET K + S SHL
Sbjct: 273 TFPFCSTSLPMVYPPLGTIMAAPADFLCRPRLPGRRITRETTKRIPPNEVSSYIYDSHLL 332
Query: 43 -YTSH 32
YT H
Sbjct: 333 DYTRH 337
>UniRef50_Q4SN05 Cluster: Chromosome 6 SCAF14544, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 6
SCAF14544, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1245
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Frame = -1
Query: 290 FFDRCTAPVK--LPPGSVLEP-DHAGVLNGD 207
FF C AP+K +PPGS+L+P +A V+ G+
Sbjct: 1124 FFQGCLAPIKVVIPPGSILQPSQNAAVVGGN 1154
>UniRef50_O64896 Cluster: Trehalose-6-phosphate phosphatase; n=15;
Magnoliophyta|Rep: Trehalose-6-phosphate phosphatase -
Arabidopsis thaliana (Mouse-ear cress)
Length = 385
Score = 33.1 bits (72), Expect = 7.3
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = -2
Query: 316 ELALGHLRYSLTDVPPQSNSPLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIID 137
++ GH +TD PP SNS L + NR+ AT++S + L L T R I+D
Sbjct: 2 DMKSGHSSPVMTDSPPISNSRLTIRQNRLPYSSAAATAISQNNNL--LLTVPRKKTGILD 59
>UniRef50_UPI000155501D Cluster: PREDICTED: similar to TERF1
(TRF1)-interacting nuclear factor 2, partial; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
TERF1 (TRF1)-interacting nuclear factor 2, partial -
Ornithorhynchus anatinus
Length = 251
Score = 32.7 bits (71), Expect = 9.6
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 270 PSQTPPWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRP 151
P + PP PR GS G RR A PPR H + RP
Sbjct: 91 PERDPP-PAPRPGSSGQPPRRSASPPRAHRPKAPAGRRRP 129
>UniRef50_Q54MI9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 970
Score = 32.7 bits (71), Expect = 9.6
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = -2
Query: 400 AFAVPMRTEHL--DQASFCPF-APREVSVLAELALG---HLRYSLTDVPPQSNSPLAVSS 239
AF P+ L D SF P PR + +L + G HL S+ +PP ++S +
Sbjct: 749 AFGQPIEDSELVEDNTSFGPMLVPRALVILKQAFFGCNAHLTESIFRLPPANDSEYNIVK 808
Query: 238 NRITREF*TATSVSATSPLC 179
+R+ RE ++ T P C
Sbjct: 809 DRVNRE-----AIGTTEPHC 823
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,914,873
Number of Sequences: 1657284
Number of extensions: 16420896
Number of successful extensions: 41240
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 39703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41218
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -