Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0369
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD0556...    29   4.6  
AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA...    29   4.6  

>AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD05563
           protein.
          Length = 1028

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +1

Query: 403 KSEIFKALNLKQKKEMNSCRTHSWLNYITGSKIFQTRQATYLDKVHKVS*SVCHEQK 573
           + EI+  L  KQ++++ S R H     I   K+F   +A    K+ K   S C  +K
Sbjct: 684 EEEIWNRLMSKQRRQLKSKRGHGKRRVILYKKVFPKLKANVKRKLKKRMSSSCRSKK 740


>AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA
           protein.
          Length = 1028

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +1

Query: 403 KSEIFKALNLKQKKEMNSCRTHSWLNYITGSKIFQTRQATYLDKVHKVS*SVCHEQK 573
           + EI+  L  KQ++++ S R H     I   K+F   +A    K+ K   S C  +K
Sbjct: 684 EEEIWNRLMSKQRRQLKSKRGHGKRRVILYKKVFPKLKANVKRKLKKRMSSSCRSKK 740


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,600,549
Number of Sequences: 53049
Number of extensions: 485562
Number of successful extensions: 833
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)