Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0367
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    27   0.21 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   6.0  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 495 LMFEKYVWRRGIYFSFWQYYMT*NHPLTVCN 403
           L+F+ Y+W   +    +QYY+  +    VCN
Sbjct: 128 LLFDAYLWISSVGVRMFQYYIGRSFTYYVCN 158


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +3

Query: 570 FLYYECSIIVPFCRLKLNFFVNFMHFISLK*HLN*VTVNFKFITSND 710
           F++    II+    +++  +VN   F  L  +L  +  NFK    ND
Sbjct: 90  FIFCSAPIIITILDIEILGYVNKAKFGKLLINLYTINYNFKESERND 136


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 582 ECSIIVPFCRLKLNFFVNFMHF 647
           E S+    CR  + +F N++HF
Sbjct: 140 EKSVFDFLCRHTVEYFQNYIHF 161


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 606 KMEQ*YYIHNIKIDSLKA*SILHIRTH 526
           + E+ YYI + ++DSL   +I  +R H
Sbjct: 131 RQEKPYYIADPEVDSLMVQAIQVLRFH 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,574
Number of Sequences: 336
Number of extensions: 3576
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)