Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0365
(515 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 88 1e-16
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 83 5e-15
UniRef50_Q49222 Cluster: Putative uncharacterized protein; n=1; ... 62 6e-09
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 60 3e-08
UniRef50_Q5CDC4 Cluster: LacOPZ-alpha peptide from pUC9; n=1; Cr... 48 1e-04
UniRef50_Q47167 Cluster: D-serine deaminase activator; n=3; Esch... 47 3e-04
UniRef50_A6MBK8 Cluster: Odorranain-E1 antimicrobial peptide; n=... 45 0.001
UniRef50_Q02940 Cluster: Beta-lactamase precursor; n=1; Burkhold... 38 0.10
UniRef50_Q9QWE7 Cluster: Cysteine protease homolog; n=1; Rattus ... 38 0.18
UniRef50_Q60QF7 Cluster: Putative uncharacterized protein CBG218... 34 1.7
UniRef50_Q9L3Q4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q571Q0 Cluster: Putative N-acetylglucosamine-6-phosphat... 32 6.8
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 87.8 bits (208), Expect = 1e-16
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +2
Query: 338 MNELTHINCVALTARFPVGKPVVPAALMNRPTRGXKRFAYW 460
M+ELTHINCVALTARFPVGKPVVPAALMNRPTRG +RFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 82.6 bits (195), Expect = 5e-15
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = +1
Query: 259 LCEIVIRSQFHTTYEPEA*SVKPGVPNE*TNSH*LRCAHCPLSSRETCRASCINESANAR 438
LC +VIRSQ HTTYEP+ V+ GV + HCP S+R+T RASCI + A AR
Sbjct: 215 LCAVVIRSQSHTTYEPDDWMVQLGVLVASAPYYWSLRVHCPFSTRDTWRASCIRDPATAR 274
Query: 439 GXAVCVLGALPLPRSLTRCARS 504
AV VL ALPL RS TRC RS
Sbjct: 275 SEAVWVLVALPLLRSRTRCVRS 296
Score = 33.5 bits (73), Expect = 2.9
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = +2
Query: 257 SCVKLLSAHNSTQHTSRKHKV*SLGCLMNELTHINCVALTARFPVGKPVVPAALMNRPTR 436
S V S H ST TSR+ V SLGC H + P P + A +RP R
Sbjct: 411 SWVTSSSVHTSTHQTSRRQHVSSLGCSCVHGAHEHGQPQPPGLPERPPQLAAPWAHRPAR 470
Query: 437 GXKR 448
+R
Sbjct: 471 RARR 474
>UniRef50_Q49222 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma genitalium|Rep: Putative uncharacterized
protein - Mycoplasma genitalium
Length = 77
Score = 62.5 bits (145), Expect = 6e-09
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +2
Query: 218 GYRARIRNHGHSFSCVKLLSAHNSTQHTSRKH 313
GYRARIRNH + SCVKLLSAHNSTQHTSRKH
Sbjct: 46 GYRARIRNHVIAVSCVKLLSAHNSTQHTSRKH 77
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -1
Query: 482 ERGSGRAPNTQTAXPRALADSLMQLARQVSRLESGQ 375
+R + APNTQTA PRALADSLMQLARQVSRLESGQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQLARQVSRLESGQ 360
>UniRef50_Q5CDC4 Cluster: LacOPZ-alpha peptide from pUC9; n=1;
Cryptosporidium hominis|Rep: LacOPZ-alpha peptide from
pUC9 - Cryptosporidium hominis
Length = 128
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 257 SCVKLLSAHNSTQHTSRKHKV 319
SCVKLLSAHNSTQHTSRKHKV
Sbjct: 108 SCVKLLSAHNSTQHTSRKHKV 128
>UniRef50_Q47167 Cluster: D-serine deaminase activator; n=3;
Escherichia coli|Rep: D-serine deaminase activator -
Escherichia coli
Length = 249
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = -1
Query: 407 ARQVSRLESGQ*AQRN*--CELVHSLGTPGFTLYASGSYVVWNCERITISHRK 255
AR +++ + ++RN CEL HSLG TL V WNCERITISHRK
Sbjct: 134 ARLIAKRTCPERSERNAIKCELAHSLGPDFHTLCFRLLCVCWNCERITISHRK 186
>UniRef50_A6MBK8 Cluster: Odorranain-E1 antimicrobial peptide; n=31;
Odorrana grahami|Rep: Odorranain-E1 antimicrobial
peptide - Rana grahami (Yunnanfu frog) (Huia grahami)
Length = 171
Score = 44.8 bits (101), Expect = 0.001
Identities = 31/65 (47%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -3
Query: 450 NRXSPRVGRFINAAG-TTGFPTGKRAVSATQLM*VSSFIRHPRLYTLCFRLVCCVEL*AD 274
N R G INAAG T G TG+ AV+A Q+M S R RL +L +VC EL AD
Sbjct: 11 NNLFSRGGGRINAAGGTAGLTTGQPAVTAPQIMGGSLLRRPRRLSSLFLLVVCWEELWAD 70
Query: 273 NNFTQ 259
N F Q
Sbjct: 71 NFFPQ 75
>UniRef50_Q02940 Cluster: Beta-lactamase precursor; n=1;
Burkholderia cepacia|Rep: Beta-lactamase precursor -
Burkholderia cepacia (Pseudomonas cepacia)
Length = 313
Score = 38.3 bits (85), Expect = 0.10
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = -2
Query: 373 ERNAINVS*FIH*APQALHFMLPARMLCGIVSG*QF 266
ERNAINVS MLPARMLCGIVS F
Sbjct: 194 ERNAINVSYLTALGTPGFTLMLPARMLCGIVSDNNF 229
>UniRef50_Q9QWE7 Cluster: Cysteine protease homolog; n=1; Rattus
sp.|Rep: Cysteine protease homolog - Rattus sp
Length = 57
Score = 37.5 bits (83), Expect = 0.18
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1
Query: 308 SGSYVVWNCERITISHRKSY 249
SGSYVV NCERITISHR SY
Sbjct: 34 SGSYVV-NCERITISHRPSY 52
>UniRef50_Q60QF7 Cluster: Putative uncharacterized protein CBG21838;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG21838 - Caenorhabditis
briggsae
Length = 488
Score = 34.3 bits (75), Expect = 1.7
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -2
Query: 214 IFYLLTQQRLFVINSIMWNSKLELKTNTRLAILEKKML 101
+F LL +LF+IN++M K+EL RLA+++ M+
Sbjct: 192 VFSLLLCIKLFIINNVMKTGKVELSRANRLALIDSAMV 229
>UniRef50_Q9L3Q4 Cluster: Putative uncharacterized protein; n=1;
Eubacterium acidaminophilum|Rep: Putative
uncharacterized protein - Eubacterium acidaminophilum
Length = 274
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2
Query: 218 GYRARIRNHGHSFSCVK 268
GYRARIRNHGHS VK
Sbjct: 165 GYRARIRNHGHSCMIVK 181
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1
Query: 448 VCVLGALPLPRSLTRCARSF 507
+C G +PLPRSLTR ARSF
Sbjct: 30 ICDTGDIPLPRSLTRYARSF 49
>UniRef50_Q571Q0 Cluster: Putative N-acetylglucosamine-6-phosphate
deacetylase; n=1; Aeromonas punctata|Rep: Putative
N-acetylglucosamine-6-phosphate deacetylase - Aeromonas
punctata (Aeromonas caviae)
Length = 219
Score = 32.3 bits (70), Expect = 6.8
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -3
Query: 369 ATQLM*VSSFIRHPRLYTLCFRLVCC 292
ATQLM VSS IRHP L T VCC
Sbjct: 3 ATQLMGVSSLIRHPSL-TFXLPAVCC 27
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,004,145
Number of Sequences: 1657284
Number of extensions: 8998050
Number of successful extensions: 19703
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19688
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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