Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0365
         (515 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        23   4.6  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   6.1  
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         23   8.1  

>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 242 DYEFELGTRDFL 207
           DYEF++GT+ FL
Sbjct: 117 DYEFDIGTKMFL 128


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 250 MTMITNSSSVPVIFYLLTQ 194
           +TM+ +  SVP IFY  TQ
Sbjct: 162 LTMVGSVHSVPYIFYAGTQ 180


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 254 SYDHDYEFELGTRDF 210
           ++DHD EF +  RDF
Sbjct: 43  NFDHDGEFWMSYRDF 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,246
Number of Sequences: 2352
Number of extensions: 9890
Number of successful extensions: 52
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)