Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0362
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   6.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.9  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 433 ICSEAKWTTLTLEIQRMPLISSTVGR 510
           +  ++KW   +  I+ MPL++  +GR
Sbjct: 413 LAEDSKWRVRSAIIEYMPLLAGQLGR 438


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 490 ISSTVGRRTDSRTHKDSCQ 546
           ISSTV R TD+    ++C+
Sbjct: 44  ISSTVSRNTDTYPTLETCR 62


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 112 RTRLGDAIDKTSLKILKESYNLADDKNVIASPLGVMLLLSLYESGAG 252
           +  L  A+D     +L   +NL   K+ IA P    ++L L  +  G
Sbjct: 619 KINLKHALDLDRQGLLHRQFNLPPAKDTIAVPNNGYVVLRLRANNPG 665


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/26 (23%), Positives = 15/26 (57%)
 Frame = +2

Query: 404 VGRRVLQDSESVQKRSGQH*LWRSKE 481
           +G ++  ++ + ++  G H +W S E
Sbjct: 358 IGVKIALEAATTEREGGYHDIWMSGE 383


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/26 (23%), Positives = 15/26 (57%)
 Frame = +2

Query: 404 VGRRVLQDSESVQKRSGQH*LWRSKE 481
           +G ++  ++ + ++  G H +W S E
Sbjct: 358 IGVKIALEAATTEREGGYHDIWMSGE 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,393
Number of Sequences: 336
Number of extensions: 4252
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)