Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0360
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 117 8e-27
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 103 1e-22
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 78 7e-15
U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protea... 77 1e-14
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 77 2e-14
U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protea... 73 2e-13
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 56 8e-13
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 56 8e-13
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 63 2e-10
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 63 2e-10
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 63 2e-10
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 63 2e-10
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 62 4e-10
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 61 7e-10
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 59 3e-09
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 48 3e-08
U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 54 1e-07
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 50 1e-06
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical p... 31 0.64
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 2.6
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 2.6
AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen prot... 29 2.6
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 29 2.6
Z12017-6|CAE47469.1| 734|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z12017-5|CAA78052.2| 859|Caenorhabditis elegans Hypothetical pr... 29 3.4
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 6.0
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 6.0
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 6.0
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 28 6.0
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 28 6.0
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 28 6.0
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 28 6.0
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 28 7.9
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 28 7.9
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 28 7.9
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 28 7.9
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 28 7.9
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 7.9
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 117 bits (282), Expect = 8e-27
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = +3
Query: 258 DVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHN 437
+V G E L NY+DAQY+G ISIGTP Q+F V+FDTGSSNLW+PSKKC + +IAC+LH+
Sbjct: 77 NVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGSSNLWIPSKKCPFYDIACMLHH 136
Query: 438 KYDSRKSKTYVANGTQFAIQY 500
+YDS+ S TY +G + AIQY
Sbjct: 137 RYDSKSSSTYKEDGRKMAIQY 157
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/52 (63%), Positives = 38/52 (73%)
Frame = +2
Query: 509 SLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAV 664
S+ GF+S D V V G+ Q FAEA SEPG+ FVAAKFDGILGMA+ IAV
Sbjct: 161 SMKGFISKDSVCVAGVCAEDQPFAEATSEPGITFVAAKFDGILGMAYPEIAV 212
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 103 bits (248), Expect = 1e-22
Identities = 43/74 (58%), Positives = 57/74 (77%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKS 458
E LS+Y +AQYYG ++IGTPPQ+F+V+FDTGSSNLWVP C + +IAC +HN++D +KS
Sbjct: 59 EGLSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKS 118
Query: 459 KTYVANGTQFAIQY 500
+ A G F IQY
Sbjct: 119 SSCTATGASFEIQY 132
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 563 RRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTR 679
+ Q A A SEPG+ FVAAKFDGI GM + TI+V+ +++
Sbjct: 158 KNQGLACATSEPGITFVAAKFDGIFGMGWDTISVNKISQ 196
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 77.8 bits (183), Expect = 7e-15
Identities = 37/80 (46%), Positives = 51/80 (63%)
Frame = +3
Query: 261 VTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK 440
V +P+ ++++ D +Y G I+IGTPPQ F VV DTGS+NLWVP C T C ++
Sbjct: 57 VFASAPQNVNDFGDVEYLGNITIGTPPQQFIVVLDTGSANLWVPGSNCDGT---CKGKSE 113
Query: 441 YDSRKSKTYVANGTQFAIQY 500
+DS KS T+ NG + IQY
Sbjct: 114 FDSSKSTTFKKNGQSWQIQY 133
Score = 31.5 bits (68), Expect = 0.64
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 509 SLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHV 673
S G + D V GG L V TF A S F +GILG+AF+++AVD V
Sbjct: 137 SAKGIMGVDTVAFGGASEQQLLVPSTTFGIA-SHISSNFKNDAAEGILGLAFTSLAVDGV 195
Query: 674 T 676
T
Sbjct: 196 T 196
>U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protease
protein 5 protein.
Length = 393
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +3
Query: 273 SPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSR 452
+P+ ++++ D +Y G I+IGTPPQ F VV DTGSSNLWVP C + +C +Y S
Sbjct: 61 APQNVNDFGDFEYLGNITIGTPPQPFLVVLDTGSSNLWVPGPSC---DGSCKGKREYQST 117
Query: 453 KSKTYVANGTQFAIQY 500
KS T+ ANG + IQY
Sbjct: 118 KSSTFKANGKPWQIQY 133
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +2
Query: 518 GFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHV 673
G+L D V G L V TF A + F +GILG+AF+++AVDHV
Sbjct: 140 GYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKNDAAEGILGLAFTSLAVDHV 195
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/75 (49%), Positives = 49/75 (65%)
Frame = +3
Query: 276 PEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRK 455
P+ ++++ D +Y G I+IGTP Q F VV DTGSSNLW+P C TN C +K+DS
Sbjct: 60 PQNVNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTCK-TN--CKTKSKFDSTA 116
Query: 456 SKTYVANGTQFAIQY 500
S T+V NG + IQY
Sbjct: 117 SSTFVKNGKSWTIQY 131
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +2
Query: 515 SGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHV 673
+G L D V G L V TF A S+ F DGILG+AF+++AVD V
Sbjct: 137 AGILGQDTVRFGAKGDSQLSVPTTTFGIA-SKISADFKNDATDGILGLAFTSLAVDGV 193
>U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protease
protein.
Length = 388
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKS 458
+P +Y D Y G I++GTPPQ VV DTGSSNLWVP C + +C +Y S KS
Sbjct: 58 QPFVDYFDDFYLGNITLGTPPQPATVVLDTGSSNLWVPGPSC---DGSCKGKREYQSTKS 114
Query: 459 KTYVANGTQFAIQY 500
T+ ANG + IQY
Sbjct: 115 STFKANGKPWQIQY 128
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +2
Query: 518 GFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHV 673
G+L D V G L V TF A + F GILG+AF+++AVDHV
Sbjct: 135 GYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKNDAAGGILGLAFTSLAVDHV 190
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 56.4 bits (130), Expect(2) = 8e-13
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 285 LSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 404
+++Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 272 VNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 311
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +2
Query: 509 SLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHV 673
S GFL D +T GG L V F +A S F DGILG+AF +IAVD +
Sbjct: 378 SARGFLGQDTITFGGIGEPQLAVPNTVFGQATSLAAF-FEGQPLDGILGLAFKSIAVDQI 436
Query: 674 T 676
T
Sbjct: 437 T 437
Score = 34.7 bits (76), Expect(2) = 8e-13
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 405 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQY 500
+YT+ +C NK+D+ KS +Y NG F I+Y
Sbjct: 344 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEY 374
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 56.4 bits (130), Expect(2) = 8e-13
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 285 LSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 404
+++Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 66 VNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 105
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +2
Query: 509 SLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHV 673
S GFL D +T GG L V F +A S F DGILG+AF +IAVD +
Sbjct: 172 SARGFLGQDTITFGGIGEPQLAVPNTVFGQATSLAAF-FEGQPLDGILGLAFKSIAVDQI 230
Query: 674 T 676
T
Sbjct: 231 T 231
Score = 34.7 bits (76), Expect(2) = 8e-13
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 405 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQY 500
+YT+ +C NK+D+ KS +Y NG F I+Y
Sbjct: 138 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEY 168
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKY 443
+P +Y D Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+
Sbjct: 58 QPFVDYFDDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKF 117
Query: 444 DSRKSKTYVANGTQFAIQY 500
D+ KS T+V +F+IQY
Sbjct: 118 DTTKSTTFVKETRKFSIQY 136
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 509 SLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHV 673
S +G+L D + GGL V+ Q F + + F DGILG+ + +AVD V
Sbjct: 140 SCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGWPALAVDQV 193
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKY 443
+P +Y D Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+
Sbjct: 57 QPFVDYFDDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKF 116
Query: 444 DSRKSKTYVANGTQFAIQY 500
D+ KS T+V +F+IQY
Sbjct: 117 DTTKSTTFVKETRKFSIQY 135
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 509 SLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHV 673
S +G+L D + GGL V+ Q F + + F DGILG+ ++ +AVD V
Sbjct: 139 SCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGWTALAVDQV 192
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKY 443
+P +Y D Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+
Sbjct: 58 QPFVDYFDDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKF 117
Query: 444 DSRKSKTYVANGTQFAIQY 500
D+ KS T+V +F+IQY
Sbjct: 118 DTTKSTTFVKETRKFSIQY 136
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 509 SLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHV 673
S +G+L D + GGL V+ Q F + + F DGILG+ + +AVD V
Sbjct: 140 SCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGWPALAVDQV 193
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKY 443
+P +Y D Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+
Sbjct: 58 QPFVDYFDDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKF 117
Query: 444 DSRKSKTYVANGTQFAIQY 500
D+ KS T+V +F+IQY
Sbjct: 118 DTTKSTTFVKETRKFSIQY 136
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 509 SLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHV 673
S +G+L D + GGL V+ Q F + + F DGILG+ + +AVD V
Sbjct: 140 SCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGWPALAVDQV 193
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +3
Query: 252 KYDVTGPSPEPLSNYLDAQYYGVISIGTP-----PQSFKVVFDTGSSNLWVPSKKCHYTN 416
K+ + + ++++ D Y+G I++GTP Q+F VV DTGSSN+WVP C +
Sbjct: 47 KHTIHKGQHQHVADFRDFAYFGNITLGTPIESTAEQTFLVVLDTGSSNVWVPDNSCGIDD 106
Query: 417 --IACLLHNKYDSRKSKTYVANGTQFAIQY 500
AC KY S +Y +GT F+I Y
Sbjct: 107 KKSACTYKKKYFGTDSSSYEKDGTPFSISY 136
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-------LLHN 437
+P+S+Y D Y G ++GTPPQ +V DTGS+N+WV C N+ C
Sbjct: 55 QPISDYSDEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASC--DNMFCNGWIGSNYTRQ 112
Query: 438 KYDSRKSKTYVANGTQFAIQY 500
K+D+ KS ++ +F+IQY
Sbjct: 113 KFDTSKSSSFSRENRKFSIQY 133
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 515 SGFLSTDDVTV-GGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 676
SG+L TD V + GGL +R+Q A ++ + F DGI G+A+ +AVD +T
Sbjct: 139 SGYLGTDTVGLGGGLTIRKQELGIA-NKLDVDFAVQPMDGIFGLAWPALAVDQIT 192
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKY 443
+PL +Y D Y I++GTPPQ VV DT S+NLWV S+ C+ + K+
Sbjct: 58 QPLIDYYDDMYLANITVGTPPQPASVVLDTASANLWVIDAACNSQACNGNPGSGYTKQKF 117
Query: 444 DSRKSKTYVANGTQFAIQY 500
+ KS T+V +F+IQY
Sbjct: 118 NPNKSSTFVKGTRRFSIQY 136
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 515 SGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 676
SG+L TD + +GGL V+ Q F A + G + DGI G+ + I+VD VT
Sbjct: 142 SGYLGTDVLQLGGLTVKAQEFGVA-TNLGSVLGSEPMDGIFGLGWPAISVDQVT 194
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYD 446
+PL + D G I+IG+PPQS V DT S+NLWV C N + ++ +K++
Sbjct: 52 QPLLGFSDDPCIGNITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFN 111
Query: 447 SRKSKTYVANGTQFAIQY 500
+ KS ++V + +F IQY
Sbjct: 112 TTKSTSFVKSNRKFNIQY 129
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 300 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 470
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 471 ANGTQFAIQY 500
F+ +Y
Sbjct: 511 EGNRTFSTEY 520
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 515 SGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 676
SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++VD VT
Sbjct: 135 SGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALSVDQVT 187
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +2
Query: 515 SGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 676
+G+L TD V +GGL + +Q A + GL F + GI +A+ ++VD VT
Sbjct: 524 TGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAWPALSVDQVT 576
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYD 446
+PL + D G I+IG+PPQS V DT S+NLWV C N + ++ +K++
Sbjct: 52 QPLLGFSDDPCIGNITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFN 111
Query: 447 SRKSKTYVANGTQFAIQY 500
+ KS ++V + +F IQY
Sbjct: 112 TTKSTSFVKSNRKFNIQY 129
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 300 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 470
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 471 ANGTQFAIQY 500
F+ +Y
Sbjct: 511 EGNRTFSTEY 520
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 515 SGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 676
SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++VD VT
Sbjct: 135 SGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALSVDQVT 187
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +2
Query: 515 SGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 676
+G+L TD V +GGL + +Q A + GL F + GI +A+ ++VD VT
Sbjct: 524 TGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAWPALSVDQVT 576
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 48.4 bits (110), Expect(2) = 3e-08
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3
Query: 273 SPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 404
S P+ +Y D Y IS+G+P Q+F + D+GSSNLWVP C
Sbjct: 60 SSSPVIDYEDMAYMVQISLGSPAQNFVLFIDSGSSNLWVPDITC 103
Score = 27.1 bits (57), Expect(2) = 3e-08
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 411 TNIACLLHNKYDSRKSKTYVANGTQFAIQY 500
T AC ++++S S +YV NG +F + Y
Sbjct: 144 TTDACQSKHRFNSSLSSSYVTNGQKFDMTY 173
>U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical
protein F28A12.4 protein.
Length = 389
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +3
Query: 288 SNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTY 467
++Y+ +Y G I++GTP Q+F VV DTGS+NL +P C C ++ + S TY
Sbjct: 65 TDYVYYEYMGNITVGTPDQNFIVVLDTGSANLLIPGTNC---TTYCEKKRLFNEKASSTY 121
Query: 468 VANGTQFAIQY 500
+A + I+Y
Sbjct: 122 IATNRPWQIKY 132
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 518 GFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 676
G L D V +GG L + R ++ G F + +GI G+AF+ +AVD++T
Sbjct: 139 GTLGIDTVKIGGSGEAQLAIPR-SYLGVADTVGSDFKWSPKEGIFGLAFTALAVDNIT 195
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +3
Query: 282 PLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-----LLHN--K 440
PL++Y+D Y I++GTPPQS VV TGS+N WV C T+ AC H K
Sbjct: 56 PLADYMDEIYTANITVGTPPQSASVVMGTGSANFWVVGAGC--TSPACNGFPDSGHTKLK 113
Query: 441 YDSRKSKTYVANGTQFAIQY 500
+ S KS ++V +F I Y
Sbjct: 114 FYSNKSSSFVDLNRKFFINY 133
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2
Query: 515 SGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 676
SG+L TD + +GGL V+ Q FA ++ DG+LG+A+ +AVD +T
Sbjct: 139 SGYLGTDVLQLGGLTVKNQEFA-VTTQISDQMGHFPLDGVLGLAWPPVAVDQIT 191
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/94 (28%), Positives = 43/94 (45%)
Frame = +3
Query: 279 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKS 458
E + ++ D Y + IGTP Q F+V DT SSNLWV +C + +Y+ S
Sbjct: 52 ESIYDHFDEYYTVSVRIGTPAQHFEVALDTTSSNLWVFGVECKSQSCQGHRIREYNRTAS 111
Query: 459 KTYVANGTQFAIQYXXXXXXXXXXXXXXPWAGSR 560
T++A + F + + +AGS+
Sbjct: 112 STFIAGTSNFVLPFNDGDVSGDLGKDNIQFAGSK 145
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 291 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNI---ACLLHNKYDSRKSK 461
++ D Y + IGTP Q F+V FDT SSNLWV +C N +Y+ S
Sbjct: 147 DHFDEYYTAGVRIGTPAQHFQVAFDTTSSNLWVFGVECRSQNCHGGRGRRDREYNRTASS 206
Query: 462 TYVANGTQFAIQY 500
T+VA + F + Y
Sbjct: 207 TFVAGTSSFNLPY 219
>Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical
protein T21B4.1 protein.
Length = 306
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 547 HGDIISGEEAGEAPEPYCIANWVPFATYVLDLRLSYLLCSKQ 422
+ II + A E + NW F T L +++SYLLC+K+
Sbjct: 225 YNQIIGTKFASERKIGMLLQNWSNFGTTPLIIQISYLLCNKR 266
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = -1
Query: 733 DRTRRRAARVPEPPCCRTPGHMVHCDSAEGHPEDPVELGGHEGKPGLR---HGLGERLAP 563
D RR A+ + PG + C P P G EG PGL+ GE AP
Sbjct: 115 DEGRRGASGISLATTHDIPGGCIKCPEGPAGPPGPDGDSGPEGFPGLQGQSGPSGEDGAP 174
Query: 562 HLEPAHGD 539
E A GD
Sbjct: 175 GQEGAPGD 182
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -2
Query: 639 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERLRSRTVSRT 484
P P + + +SP + A + R+ +SPP + + K R + R SR+
Sbjct: 108 PTAPPGVQKSSSSPSASKAESRPLRKRISPPPSENREKEKQSRDKERRRSRS 159
>AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen protein
107, isoform a protein.
Length = 256
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -1
Query: 676 GHMVHCDSAE---GHPEDPVELGGHEGKPGLRHGLGERLAPHLEPAHGDIISGEEAGEAP 506
G + C + E P+ P G +G+PG G+ AP GD + + GEA
Sbjct: 129 GGCIKCPAGEPGPAGPDGPAGAPGADGQPGAPGNAGQDGAPGAAGEQGDAGAAGQDGEAG 188
Query: 505 EP 500
P
Sbjct: 189 AP 190
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -1
Query: 676 GHMVHCDSAE---GHPEDPVELGGHEGKPGLRHGLGERLAPHLEPAHGDIISGEEAGEAP 506
G + C + E P+ P G +G+PG G+ AP GD + + GEA
Sbjct: 129 GGCIKCPAGEPGPAGPDGPAGAPGADGQPGAPGNAGQDGAPGAAGEQGDAGAAGQDGEAG 188
Query: 505 EP 500
P
Sbjct: 189 AP 190
>Z12017-6|CAE47469.1| 734|Caenorhabditis elegans Hypothetical
protein R08D7.6b protein.
Length = 734
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/81 (27%), Positives = 36/81 (44%)
Frame = -2
Query: 729 EREDGLHESLSHHVVEHRVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSP 550
+R DGLH HH H S + + AA ++ + +AS VWR+T P
Sbjct: 25 QRGDGLH----HH---HHEAASGSTCCGGMTVFTGANAAKSSNEPAGSASPTVWRKTSHP 77
Query: 549 PTVTSSVERKPERLRSRTVSR 487
P ++ E + L+ + +R
Sbjct: 78 PLHFNNNETRNRNLQMQLKNR 98
>Z12017-5|CAA78052.2| 859|Caenorhabditis elegans Hypothetical
protein R08D7.6a protein.
Length = 859
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/81 (27%), Positives = 36/81 (44%)
Frame = -2
Query: 729 EREDGLHESLSHHVVEHRVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSP 550
+R DGLH HH H S + + AA ++ + +AS VWR+T P
Sbjct: 25 QRGDGLH----HH---HHEAASGSTCCGGMTVFTGANAAKSSNEPAGSASPTVWRKTSHP 77
Query: 549 PTVTSSVERKPERLRSRTVSR 487
P ++ E + L+ + +R
Sbjct: 78 PLHFNNNETRNRNLQMQLKNR 98
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 483 GCHSRRTSWTCGCRTCCAANKRCWCS 406
GC R C CR CC + C C+
Sbjct: 84 GCCCCRPKCCCCCRRCCTCCRTCCCT 109
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 483 GCHSRRTSWTCGCRTCCAANKRCWCS 406
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -2
Query: 612 TKASPGSDTASANVWRRTLSPPTVTSSVERKPERLRSRTVSRTGCHSRRTSWTCGCRTCC 433
+K S + T + T PT T+ VE KP+ + + + T T+ T
Sbjct: 315 SKTSSTTTTTTTTTTTTTTEEPTTTTEVEEKPKDKKVSSTTTTTKKPTTTTTTTPKPVER 374
Query: 432 AANKRC 415
+ NK+C
Sbjct: 375 SRNKKC 380
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 483 GCHSRRTSWTCGCRTCCAANKRCWCS 406
GC R C CR CC + C C+
Sbjct: 83 GCCCCRPRCCCCCRRCCTCCRTCCCT 108
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 483 GCHSRRTSWTCGCRTCCAANKRCWCS 406
GC R C CR CC + C C+
Sbjct: 84 GCCCCRPRCCCCCRRCCTCCRTCCCT 109
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 483 GCHSRRTSWTCGCRTCCAANKRCWCS 406
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 639 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERLRSRTVSRTG 481
P +P+ AA P + T+ P V SSV+R+P R+R+V R+G
Sbjct: 365 PAVPAGGAARNRQPLR--VNPGTPSTTIKKPPVASSVQRQPP-TRARSVDRSG 414
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 639 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERLRSRTVSRTG 481
P +P+ AA P + T+ P V SSV+R+P R+R+V R+G
Sbjct: 365 PAVPAGGAARNRQPLR--VNPGTPSTTIKKPPVASSVQRQPP-TRARSVDRSG 414
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 639 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERLRSRTVSRTG 481
P +P+ AA P + T+ P V SSV+R+P R+R+V R+G
Sbjct: 365 PAVPAGGAARNRQPLR--VNPGTPSTTIKKPPVASSVQRQPP-TRARSVDRSG 414
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 639 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERLRSRTVSRTG 481
P +P+ AA P + T+ P V SSV+R+P R+R+V R+G
Sbjct: 365 PAVPAGGAARNRQPLR--VNPGTPSTTIKKPPVASSVQRQPP-TRARSVDRSG 414
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 462 SWTCGCRTCCAANKRCWCSGTF 397
S CG CA NKRC C T+
Sbjct: 29 STDCGTGNYCAGNKRCACLTTY 50
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 639 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 508
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 2 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 43
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 639 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 508
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 4 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 45
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 639 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 508
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 1 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 42
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 639 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 508
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 39 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 80
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 639 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 508
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 113 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,025,562
Number of Sequences: 27780
Number of extensions: 372762
Number of successful extensions: 1274
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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