Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0358
         (476 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1; ...    51   1e-05
UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1; ...    44   0.002
UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostrid...    35   1.1  
UniRef50_Q7RHV2 Cluster: Putative uncharacterized protein PY0388...    33   3.3  
UniRef50_Q0R0E6 Cluster: Ubiquitin carrier protein; n=1; Symbiod...    31   10.0 

>UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1;
           Thermobia domestica|Rep: Putative uncharacterized
           protein - Thermobia domestica (firebrat)
          Length = 53

 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -1

Query: 254 SNKKKSLRPRCWIKIKFKCRSLKF*SVRSLKSYMI 150
           S +++ LRPRCWIKI  +CRSL + SVR LKSYMI
Sbjct: 19  SYRQERLRPRCWIKILSRCRSLVYRSVRPLKSYMI 53


>UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1;
           Haemaphysalis qinghaiensis|Rep: Putative uncharacterized
           protein - Haemaphysalis qinghaiensis
          Length = 30

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -3

Query: 201 M*KFKILICSIIKILHDLSSNRCEPGWFLS 112
           M K K  +CS  +ILHDLS +RCE GWFLS
Sbjct: 1   MKKLKKEVCSTFEILHDLSLDRCESGWFLS 30


>UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostridium
           botulinum A|Rep: Conserved domain protein - Clostridium
           botulinum (strain ATCC 19397 / Type A)
          Length = 479

 Score = 34.7 bits (76), Expect = 1.1
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -3

Query: 192 FKILICSIIKILHDLSSNRCEPGWFLSFNIYNILVRK 82
           +KI    IIK+++ L  N CE G+  SFN YN + ++
Sbjct: 277 YKISDYRIIKLINALEDNSCEVGYHYSFNSYNSISKR 313


>UniRef50_Q7RHV2 Cluster: Putative uncharacterized protein PY03881;
           n=8; Plasmodium|Rep: Putative uncharacterized protein
           PY03881 - Plasmodium yoelii yoelii
          Length = 530

 Score = 33.1 bits (72), Expect = 3.3
 Identities = 22/60 (36%), Positives = 34/60 (56%)
 Frame = +2

Query: 128 GSHRFELRSCKILMIEQIKILNFYI*ILS*SNIEVANFSFYLTKKQNYAVIPKVIFSFNQ 307
           G H F + S +I+M E +K  N++  I    N++V +FS  LT+K +  VI    FS +Q
Sbjct: 255 GPHCFFICSDEIIMTEIVKFCNYFCNIKM-LNMKVDSFSILLTQKYDILVININNFSSSQ 313


>UniRef50_Q0R0E6 Cluster: Ubiquitin carrier protein; n=1;
           Symbiodinium sp. C3|Rep: Ubiquitin carrier protein -
           Symbiodinium sp. C3
          Length = 268

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +2

Query: 14  NNY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRNQPGSHRFE-LRSCKILMIE 175
           N+Y FK   I F+T  Y+CN+ +     L ILKD   P    F+ L S + LM +
Sbjct: 183 NDYPFKPPKINFHTPIYHCNVNTNGAICLDILKDSWSPSLSVFKCLESIRALMAD 237


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,483,881
Number of Sequences: 1657284
Number of extensions: 5009024
Number of successful extensions: 6741
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6740
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)